Protein–RNA interactions for Protein: Q9CQV4

Retreg3, Reticulophagy regulator 3, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg3Q9CQV4 Gm45606-201ENSMUST00000209836 2795 ntBASIC17.85■□□□□ 0.45
Retreg3Q9CQV4 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Retreg3Q9CQV4 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Retreg3Q9CQV4 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Retreg3Q9CQV4 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Retreg3Q9CQV4 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Retreg3Q9CQV4 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Retreg3Q9CQV4 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Retreg3Q9CQV4 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC17.84■□□□□ 0.45
Retreg3Q9CQV4 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Retreg3Q9CQV4 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Retreg3Q9CQV4 Gm15375-201ENSMUST00000119510 849 ntBASIC17.84■□□□□ 0.45
Retreg3Q9CQV4 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC17.84■□□□□ 0.45
Retreg3Q9CQV4 Gm43371-201ENSMUST00000202838 1031 ntBASIC17.84■□□□□ 0.45
Retreg3Q9CQV4 Arhgef33-211ENSMUST00000225658 473 ntBASIC17.84■□□□□ 0.45
Retreg3Q9CQV4 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Retreg3Q9CQV4 Gm44832-201ENSMUST00000208849 2303 ntBASIC17.84■□□□□ 0.45
Retreg3Q9CQV4 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Retreg3Q9CQV4 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Retreg3Q9CQV4 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Retreg3Q9CQV4 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Retreg3Q9CQV4 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Retreg3Q9CQV4 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Retreg3Q9CQV4 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Retreg3Q9CQV4 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Retreg3Q9CQV4 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Retreg3Q9CQV4 Gm5643-201ENSMUST00000117081 966 ntBASIC17.83■□□□□ 0.44
Retreg3Q9CQV4 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC17.83■□□□□ 0.44
Retreg3Q9CQV4 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Retreg3Q9CQV4 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Retreg3Q9CQV4 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Retreg3Q9CQV4 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Retreg3Q9CQV4 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Retreg3Q9CQV4 Zcchc6-207ENSMUST00000225576 2499 ntBASIC17.82■□□□□ 0.44
Retreg3Q9CQV4 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Retreg3Q9CQV4 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Retreg3Q9CQV4 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
Retreg3Q9CQV4 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Retreg3Q9CQV4 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Retreg3Q9CQV4 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Retreg3Q9CQV4 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Retreg3Q9CQV4 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC17.82■□□□□ 0.44
Retreg3Q9CQV4 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC17.82■□□□□ 0.44
Retreg3Q9CQV4 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Retreg3Q9CQV4 Cox17-201ENSMUST00000050273 444 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Retreg3Q9CQV4 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Retreg3Q9CQV4 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Retreg3Q9CQV4 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC17.82■□□□□ 0.44
Retreg3Q9CQV4 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC17.82■□□□□ 0.44
Retreg3Q9CQV4 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Retreg3Q9CQV4 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Retreg3Q9CQV4 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Retreg3Q9CQV4 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC17.81■□□□□ 0.44
Retreg3Q9CQV4 Gm13836-201ENSMUST00000121159 501 ntBASIC17.81■□□□□ 0.44
Retreg3Q9CQV4 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC17.81■□□□□ 0.44
Retreg3Q9CQV4 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC17.81■□□□□ 0.44
Retreg3Q9CQV4 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Retreg3Q9CQV4 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Retreg3Q9CQV4 Gm42900-201ENSMUST00000197184 2167 ntBASIC17.81■□□□□ 0.44
Retreg3Q9CQV4 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Retreg3Q9CQV4 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Retreg3Q9CQV4 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC17.81■□□□□ 0.44
Retreg3Q9CQV4 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Retreg3Q9CQV4 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Retreg3Q9CQV4 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Retreg3Q9CQV4 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Retreg3Q9CQV4 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Retreg3Q9CQV4 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC17.8■□□□□ 0.44
Retreg3Q9CQV4 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Retreg3Q9CQV4 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Retreg3Q9CQV4 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC17.8■□□□□ 0.44
Retreg3Q9CQV4 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Retreg3Q9CQV4 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Retreg3Q9CQV4 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC17.8■□□□□ 0.44
Retreg3Q9CQV4 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC17.8■□□□□ 0.44
Retreg3Q9CQV4 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Retreg3Q9CQV4 Nrn1-203ENSMUST00000223611 1443 ntBASIC17.8■□□□□ 0.44
Retreg3Q9CQV4 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Retreg3Q9CQV4 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Retreg3Q9CQV4 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC17.8■□□□□ 0.44
Retreg3Q9CQV4 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Retreg3Q9CQV4 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Retreg3Q9CQV4 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Retreg3Q9CQV4 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Retreg3Q9CQV4 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Retreg3Q9CQV4 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Retreg3Q9CQV4 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Retreg3Q9CQV4 Gm10698-201ENSMUST00000182663 604 ntBASIC17.79■□□□□ 0.44
Retreg3Q9CQV4 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC17.79■□□□□ 0.44
Retreg3Q9CQV4 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Retreg3Q9CQV4 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Retreg3Q9CQV4 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Retreg3Q9CQV4 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Retreg3Q9CQV4 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC17.79■□□□□ 0.44
Retreg3Q9CQV4 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Retreg3Q9CQV4 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Retreg3Q9CQV4 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Retreg3Q9CQV4 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Retreg3Q9CQV4 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC17.78■□□□□ 0.44
Retreg3Q9CQV4 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms