Protein–RNA interactions for Protein: Q99PP7

Trim33, E3 ubiquitin-protein ligase TRIM33, mousemouse

Predictions only

Length 1,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim33Q99PP7 Dio3-201ENSMUST00000097228 1449 ntBASIC17.59■□□□□ 0.41
Trim33Q99PP7 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC17.59■□□□□ 0.41
Trim33Q99PP7 Gm12527-201ENSMUST00000117967 564 ntBASIC17.59■□□□□ 0.41
Trim33Q99PP7 Gm15847-201ENSMUST00000121417 1065 ntBASIC17.59■□□□□ 0.41
Trim33Q99PP7 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC17.59■□□□□ 0.41
Trim33Q99PP7 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC17.59■□□□□ 0.41
Trim33Q99PP7 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC17.59■□□□□ 0.41
Trim33Q99PP7 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Trim33Q99PP7 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trim33Q99PP7 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trim33Q99PP7 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trim33Q99PP7 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trim33Q99PP7 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Trim33Q99PP7 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trim33Q99PP7 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC17.59■□□□□ 0.41
Trim33Q99PP7 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Trim33Q99PP7 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
Trim33Q99PP7 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Trim33Q99PP7 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
Trim33Q99PP7 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Trim33Q99PP7 Flg-201ENSMUST00000050758 1488 ntBASIC17.58■□□□□ 0.41
Trim33Q99PP7 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Trim33Q99PP7 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trim33Q99PP7 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Trim33Q99PP7 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trim33Q99PP7 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trim33Q99PP7 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trim33Q99PP7 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Trim33Q99PP7 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC17.58■□□□□ 0.4
Trim33Q99PP7 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Trim33Q99PP7 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trim33Q99PP7 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Trim33Q99PP7 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trim33Q99PP7 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Trim33Q99PP7 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Trim33Q99PP7 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trim33Q99PP7 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim33Q99PP7 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim33Q99PP7 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim33Q99PP7 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim33Q99PP7 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim33Q99PP7 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC17.57■□□□□ 0.4
Trim33Q99PP7 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim33Q99PP7 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Trim33Q99PP7 Gm12669-201ENSMUST00000122162 1009 ntBASIC17.57■□□□□ 0.4
Trim33Q99PP7 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC17.57■□□□□ 0.4
Trim33Q99PP7 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim33Q99PP7 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim33Q99PP7 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim33Q99PP7 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim33Q99PP7 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Trim33Q99PP7 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim33Q99PP7 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Trim33Q99PP7 Gm44544-201ENSMUST00000207052 1844 ntBASIC17.56■□□□□ 0.4
Trim33Q99PP7 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Trim33Q99PP7 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim33Q99PP7 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim33Q99PP7 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Trim33Q99PP7 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim33Q99PP7 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Trim33Q99PP7 Gm27275-201ENSMUST00000184318 272 ntBASIC17.56■□□□□ 0.4
Trim33Q99PP7 Zfp783-201ENSMUST00000095946 670 ntBASIC17.56■□□□□ 0.4
Trim33Q99PP7 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim33Q99PP7 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim33Q99PP7 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC17.56■□□□□ 0.4
Trim33Q99PP7 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Trim33Q99PP7 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim33Q99PP7 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
Trim33Q99PP7 Dmtn-210ENSMUST00000228824 2377 ntBASIC17.55■□□□□ 0.4
Trim33Q99PP7 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Trim33Q99PP7 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim33Q99PP7 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim33Q99PP7 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim33Q99PP7 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim33Q99PP7 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Trim33Q99PP7 Gm11927-201ENSMUST00000118472 759 ntBASIC17.55■□□□□ 0.4
Trim33Q99PP7 Gm38285-201ENSMUST00000192928 922 ntBASIC17.55■□□□□ 0.4
Trim33Q99PP7 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim33Q99PP7 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim33Q99PP7 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim33Q99PP7 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim33Q99PP7 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim33Q99PP7 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim33Q99PP7 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
Trim33Q99PP7 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Trim33Q99PP7 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim33Q99PP7 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Trim33Q99PP7 Gm44832-201ENSMUST00000208849 2303 ntBASIC17.54■□□□□ 0.4
Trim33Q99PP7 Tgds-204ENSMUST00000228543 1594 ntBASIC17.54■□□□□ 0.4
Trim33Q99PP7 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim33Q99PP7 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim33Q99PP7 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim33Q99PP7 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Trim33Q99PP7 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
Trim33Q99PP7 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Trim33Q99PP7 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim33Q99PP7 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC17.54■□□□□ 0.4
Trim33Q99PP7 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim33Q99PP7 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim33Q99PP7 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 90.3 ms