Protein–RNA interactions for Protein: Q99PJ2

Trim8, Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8Q99PJ2 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Trim8Q99PJ2 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim8Q99PJ2 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim8Q99PJ2 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim8Q99PJ2 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim8Q99PJ2 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim8Q99PJ2 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Trim8Q99PJ2 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim8Q99PJ2 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim8Q99PJ2 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim8Q99PJ2 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim8Q99PJ2 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim8Q99PJ2 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Trim8Q99PJ2 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Trim8Q99PJ2 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim8Q99PJ2 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim8Q99PJ2 AC160393.1-201ENSMUST00000218378 1279 ntBASIC17.4■□□□□ 0.38
Trim8Q99PJ2 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim8Q99PJ2 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim8Q99PJ2 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC17.4■□□□□ 0.38
Trim8Q99PJ2 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim8Q99PJ2 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim8Q99PJ2 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim8Q99PJ2 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim8Q99PJ2 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim8Q99PJ2 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Trim8Q99PJ2 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
Trim8Q99PJ2 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
Trim8Q99PJ2 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC17.39■□□□□ 0.38
Trim8Q99PJ2 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Trim8Q99PJ2 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trim8Q99PJ2 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Trim8Q99PJ2 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Trim8Q99PJ2 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trim8Q99PJ2 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trim8Q99PJ2 Nespas-201ENSMUST00000143738 1083 ntBASIC17.39■□□□□ 0.37
Trim8Q99PJ2 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC17.39■□□□□ 0.37
Trim8Q99PJ2 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC17.39■□□□□ 0.37
Trim8Q99PJ2 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trim8Q99PJ2 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Trim8Q99PJ2 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC17.39■□□□□ 0.37
Trim8Q99PJ2 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Trim8Q99PJ2 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trim8Q99PJ2 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trim8Q99PJ2 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trim8Q99PJ2 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trim8Q99PJ2 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trim8Q99PJ2 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC17.38■□□□□ 0.37
Trim8Q99PJ2 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
Trim8Q99PJ2 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trim8Q99PJ2 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Trim8Q99PJ2 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC17.38■□□□□ 0.37
Trim8Q99PJ2 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trim8Q99PJ2 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trim8Q99PJ2 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trim8Q99PJ2 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trim8Q99PJ2 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trim8Q99PJ2 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Trim8Q99PJ2 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Trim8Q99PJ2 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC17.38■□□□□ 0.37
Trim8Q99PJ2 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trim8Q99PJ2 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trim8Q99PJ2 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC17.37■□□□□ 0.37
Trim8Q99PJ2 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim8Q99PJ2 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Trim8Q99PJ2 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Trim8Q99PJ2 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim8Q99PJ2 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim8Q99PJ2 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC17.37■□□□□ 0.37
Trim8Q99PJ2 Gm6420-201ENSMUST00000193885 723 ntBASIC17.37■□□□□ 0.37
Trim8Q99PJ2 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
Trim8Q99PJ2 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim8Q99PJ2 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Trim8Q99PJ2 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC17.37■□□□□ 0.37
Trim8Q99PJ2 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim8Q99PJ2 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim8Q99PJ2 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim8Q99PJ2 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim8Q99PJ2 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim8Q99PJ2 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Trim8Q99PJ2 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trim8Q99PJ2 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Trim8Q99PJ2 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Trim8Q99PJ2 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC17.36■□□□□ 0.37
Trim8Q99PJ2 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trim8Q99PJ2 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Trim8Q99PJ2 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trim8Q99PJ2 Gm10129-202ENSMUST00000193100 1316 ntBASIC17.36■□□□□ 0.37
Trim8Q99PJ2 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trim8Q99PJ2 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Trim8Q99PJ2 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC17.36■□□□□ 0.37
Trim8Q99PJ2 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trim8Q99PJ2 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trim8Q99PJ2 Gm43548-201ENSMUST00000197139 2353 ntBASIC17.36■□□□□ 0.37
Trim8Q99PJ2 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trim8Q99PJ2 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trim8Q99PJ2 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trim8Q99PJ2 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC17.35■□□□□ 0.37
Trim8Q99PJ2 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC17.35■□□□□ 0.37
Trim8Q99PJ2 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC17.35■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms