Protein–RNA interactions for Protein: Q99NB8

Ubqln4, Ubiquilin-4, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubqln4Q99NB8 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC16.14■□□□□ 0.17
Ubqln4Q99NB8 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ubqln4Q99NB8 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Ubqln4Q99NB8 Dio3-201ENSMUST00000097228 1449 ntBASIC16.14■□□□□ 0.17
Ubqln4Q99NB8 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Ubqln4Q99NB8 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ubqln4Q99NB8 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ubqln4Q99NB8 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC16.14■□□□□ 0.17
Ubqln4Q99NB8 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC16.14■□□□□ 0.17
Ubqln4Q99NB8 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Ubqln4Q99NB8 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ubqln4Q99NB8 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC16.14■□□□□ 0.17
Ubqln4Q99NB8 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ubqln4Q99NB8 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ubqln4Q99NB8 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ubqln4Q99NB8 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Ubqln4Q99NB8 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ubqln4Q99NB8 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ubqln4Q99NB8 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Ubqln4Q99NB8 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Ubqln4Q99NB8 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC16.14■□□□□ 0.17
Ubqln4Q99NB8 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ubqln4Q99NB8 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC16.14■□□□□ 0.17
Ubqln4Q99NB8 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ubqln4Q99NB8 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Ubqln4Q99NB8 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ubqln4Q99NB8 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ubqln4Q99NB8 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ubqln4Q99NB8 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ubqln4Q99NB8 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ubqln4Q99NB8 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Ubqln4Q99NB8 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Ubqln4Q99NB8 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ubqln4Q99NB8 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ubqln4Q99NB8 Gm12441-201ENSMUST00000121806 588 ntBASIC16.13■□□□□ 0.17
Ubqln4Q99NB8 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC16.13■□□□□ 0.17
Ubqln4Q99NB8 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ubqln4Q99NB8 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ubqln4Q99NB8 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Ubqln4Q99NB8 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Ubqln4Q99NB8 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ubqln4Q99NB8 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Ubqln4Q99NB8 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Ubqln4Q99NB8 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ubqln4Q99NB8 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ubqln4Q99NB8 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Ubqln4Q99NB8 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ubqln4Q99NB8 Gm12896-201ENSMUST00000118430 226 ntBASIC16.12■□□□□ 0.17
Ubqln4Q99NB8 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC16.12■□□□□ 0.17
Ubqln4Q99NB8 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC16.12■□□□□ 0.17
Ubqln4Q99NB8 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC16.12■□□□□ 0.17
Ubqln4Q99NB8 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ubqln4Q99NB8 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ubqln4Q99NB8 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ubqln4Q99NB8 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ubqln4Q99NB8 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Ubqln4Q99NB8 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Ubqln4Q99NB8 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ubqln4Q99NB8 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC16.12■□□□□ 0.17
Ubqln4Q99NB8 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ubqln4Q99NB8 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ubqln4Q99NB8 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ubqln4Q99NB8 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ubqln4Q99NB8 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ubqln4Q99NB8 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ubqln4Q99NB8 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Ubqln4Q99NB8 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ubqln4Q99NB8 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ubqln4Q99NB8 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ubqln4Q99NB8 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ubqln4Q99NB8 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ubqln4Q99NB8 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ubqln4Q99NB8 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Ubqln4Q99NB8 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC16.11■□□□□ 0.17
Ubqln4Q99NB8 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Ubqln4Q99NB8 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
Ubqln4Q99NB8 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Ubqln4Q99NB8 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC16.11■□□□□ 0.17
Ubqln4Q99NB8 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ubqln4Q99NB8 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Ubqln4Q99NB8 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Ubqln4Q99NB8 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Ubqln4Q99NB8 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Ubqln4Q99NB8 AC108858.1-201ENSMUST00000228461 1498 ntBASIC16.1■□□□□ 0.17
Ubqln4Q99NB8 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ubqln4Q99NB8 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ubqln4Q99NB8 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ubqln4Q99NB8 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ubqln4Q99NB8 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC16.1■□□□□ 0.17
Ubqln4Q99NB8 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC16.1■□□□□ 0.17
Ubqln4Q99NB8 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ubqln4Q99NB8 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ubqln4Q99NB8 Gm10418-201ENSMUST00000100943 576 ntBASIC16.1■□□□□ 0.17
Ubqln4Q99NB8 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC16.1■□□□□ 0.17
Ubqln4Q99NB8 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Ubqln4Q99NB8 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ubqln4Q99NB8 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ubqln4Q99NB8 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Ubqln4Q99NB8 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Ubqln4Q99NB8 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms