Protein–RNA interactions for Protein: Q99N57

Raf1, RAF proto-oncogene serine/threonine-protein kinase, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raf1Q99N57 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Raf1Q99N57 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC15.92■□□□□ 0.14
Raf1Q99N57 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC15.92■□□□□ 0.14
Raf1Q99N57 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
Raf1Q99N57 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
Raf1Q99N57 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Raf1Q99N57 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Raf1Q99N57 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Raf1Q99N57 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Raf1Q99N57 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Raf1Q99N57 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
Raf1Q99N57 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Raf1Q99N57 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Raf1Q99N57 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Raf1Q99N57 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Raf1Q99N57 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
Raf1Q99N57 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Raf1Q99N57 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Raf1Q99N57 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Raf1Q99N57 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
Raf1Q99N57 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Raf1Q99N57 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Raf1Q99N57 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC15.91■□□□□ 0.14
Raf1Q99N57 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
Raf1Q99N57 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
Raf1Q99N57 Gm10653-202ENSMUST00000139570 835 ntBASIC15.91■□□□□ 0.14
Raf1Q99N57 Gm3807-201ENSMUST00000193520 1168 ntBASIC15.91■□□□□ 0.14
Raf1Q99N57 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC15.91■□□□□ 0.14
Raf1Q99N57 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Raf1Q99N57 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Raf1Q99N57 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Raf1Q99N57 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Raf1Q99N57 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Raf1Q99N57 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC15.91■□□□□ 0.14
Raf1Q99N57 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC15.91■□□□□ 0.14
Raf1Q99N57 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Raf1Q99N57 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Raf1Q99N57 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Raf1Q99N57 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Raf1Q99N57 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC15.9■□□□□ 0.14
Raf1Q99N57 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Raf1Q99N57 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC15.9■□□□□ 0.14
Raf1Q99N57 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC15.9■□□□□ 0.14
Raf1Q99N57 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Raf1Q99N57 Gm10167-201ENSMUST00000150411 1479 ntBASIC15.9■□□□□ 0.14
Raf1Q99N57 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC15.9■□□□□ 0.14
Raf1Q99N57 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Raf1Q99N57 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Raf1Q99N57 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Raf1Q99N57 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Raf1Q99N57 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Raf1Q99N57 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Raf1Q99N57 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Raf1Q99N57 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Raf1Q99N57 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Raf1Q99N57 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Raf1Q99N57 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Raf1Q99N57 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Raf1Q99N57 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Raf1Q99N57 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Raf1Q99N57 Gm38205-201ENSMUST00000192243 258 ntBASIC15.89■□□□□ 0.13
Raf1Q99N57 Gm42555-201ENSMUST00000199304 1039 ntBASIC15.89■□□□□ 0.13
Raf1Q99N57 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Raf1Q99N57 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Raf1Q99N57 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Raf1Q99N57 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Raf1Q99N57 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC15.89■□□□□ 0.13
Raf1Q99N57 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Raf1Q99N57 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Raf1Q99N57 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Raf1Q99N57 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Raf1Q99N57 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Raf1Q99N57 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Raf1Q99N57 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Raf1Q99N57 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Raf1Q99N57 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Raf1Q99N57 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Raf1Q99N57 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Raf1Q99N57 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Raf1Q99N57 Gm20760-201ENSMUST00000179197 648 ntBASIC15.88■□□□□ 0.13
Raf1Q99N57 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC15.88■□□□□ 0.13
Raf1Q99N57 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC15.88■□□□□ 0.13
Raf1Q99N57 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
Raf1Q99N57 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Raf1Q99N57 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Raf1Q99N57 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Raf1Q99N57 Zcchc6-207ENSMUST00000225576 2499 ntBASIC15.88■□□□□ 0.13
Raf1Q99N57 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Raf1Q99N57 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Raf1Q99N57 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Raf1Q99N57 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Raf1Q99N57 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Raf1Q99N57 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Raf1Q99N57 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Raf1Q99N57 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Raf1Q99N57 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Raf1Q99N57 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Raf1Q99N57 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Raf1Q99N57 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Raf1Q99N57 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 48.9 ms