Protein–RNA interactions for Protein: Q99ML9

Rnf111, E3 ubiquitin-protein ligase Arkadia, mousemouse

Predictions only

Length 989 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf111Q99ML9 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC17.23■□□□□ 0.35
Rnf111Q99ML9 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC17.23■□□□□ 0.35
Rnf111Q99ML9 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Rnf111Q99ML9 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC17.23■□□□□ 0.35
Rnf111Q99ML9 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rnf111Q99ML9 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
Rnf111Q99ML9 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC17.23■□□□□ 0.35
Rnf111Q99ML9 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Rnf111Q99ML9 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Rnf111Q99ML9 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Rnf111Q99ML9 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rnf111Q99ML9 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rnf111Q99ML9 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rnf111Q99ML9 Gm43672-201ENSMUST00000199072 1731 ntBASIC17.22■□□□□ 0.35
Rnf111Q99ML9 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Rnf111Q99ML9 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC17.22■□□□□ 0.35
Rnf111Q99ML9 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Rnf111Q99ML9 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rnf111Q99ML9 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Rnf111Q99ML9 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC17.22■□□□□ 0.35
Rnf111Q99ML9 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rnf111Q99ML9 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Rnf111Q99ML9 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Rnf111Q99ML9 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rnf111Q99ML9 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rnf111Q99ML9 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rnf111Q99ML9 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rnf111Q99ML9 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rnf111Q99ML9 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rnf111Q99ML9 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rnf111Q99ML9 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Rnf111Q99ML9 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rnf111Q99ML9 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Rnf111Q99ML9 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rnf111Q99ML9 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC17.21■□□□□ 0.35
Rnf111Q99ML9 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rnf111Q99ML9 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rnf111Q99ML9 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rnf111Q99ML9 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rnf111Q99ML9 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Rnf111Q99ML9 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rnf111Q99ML9 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
Rnf111Q99ML9 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC17.21■□□□□ 0.35
Rnf111Q99ML9 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rnf111Q99ML9 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC17.21■□□□□ 0.35
Rnf111Q99ML9 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Rnf111Q99ML9 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rnf111Q99ML9 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC17.21■□□□□ 0.35
Rnf111Q99ML9 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC17.21■□□□□ 0.35
Rnf111Q99ML9 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.35
Rnf111Q99ML9 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rnf111Q99ML9 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
Rnf111Q99ML9 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Rnf111Q99ML9 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Rnf111Q99ML9 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rnf111Q99ML9 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Rnf111Q99ML9 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC17.2■□□□□ 0.34
Rnf111Q99ML9 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rnf111Q99ML9 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rnf111Q99ML9 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC17.2■□□□□ 0.34
Rnf111Q99ML9 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
Rnf111Q99ML9 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rnf111Q99ML9 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rnf111Q99ML9 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Rnf111Q99ML9 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Rnf111Q99ML9 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC17.2■□□□□ 0.34
Rnf111Q99ML9 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rnf111Q99ML9 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rnf111Q99ML9 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rnf111Q99ML9 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC17.19■□□□□ 0.34
Rnf111Q99ML9 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rnf111Q99ML9 Gm37374-201ENSMUST00000194954 1829 ntBASIC17.19■□□□□ 0.34
Rnf111Q99ML9 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rnf111Q99ML9 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC17.19■□□□□ 0.34
Rnf111Q99ML9 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rnf111Q99ML9 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rnf111Q99ML9 AC122335.2-201ENSMUST00000213901 6181 ntBASIC17.19■□□□□ 0.34
Rnf111Q99ML9 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rnf111Q99ML9 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC17.19■□□□□ 0.34
Rnf111Q99ML9 Gm37519-201ENSMUST00000191687 2210 ntBASIC17.19■□□□□ 0.34
Rnf111Q99ML9 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Rnf111Q99ML9 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC17.19■□□□□ 0.34
Rnf111Q99ML9 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Rnf111Q99ML9 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC17.19■□□□□ 0.34
Rnf111Q99ML9 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Rnf111Q99ML9 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rnf111Q99ML9 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rnf111Q99ML9 Gm43808-201ENSMUST00000202534 2065 ntBASIC17.19■□□□□ 0.34
Rnf111Q99ML9 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rnf111Q99ML9 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Rnf111Q99ML9 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rnf111Q99ML9 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Rnf111Q99ML9 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rnf111Q99ML9 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rnf111Q99ML9 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rnf111Q99ML9 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rnf111Q99ML9 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rnf111Q99ML9 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rnf111Q99ML9 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rnf111Q99ML9 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 45.7 ms