Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC16.63■□□□□ 0.25
Nkx6-1Q99MA9 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nkx6-1Q99MA9 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Nkx6-1Q99MA9 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nkx6-1Q99MA9 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nkx6-1Q99MA9 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nkx6-1Q99MA9 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Nkx6-1Q99MA9 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC16.62■□□□□ 0.25
Nkx6-1Q99MA9 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nkx6-1Q99MA9 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nkx6-1Q99MA9 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC16.62■□□□□ 0.25
Nkx6-1Q99MA9 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC16.62■□□□□ 0.25
Nkx6-1Q99MA9 Gm29518-201ENSMUST00000190858 372 ntBASIC16.62■□□□□ 0.25
Nkx6-1Q99MA9 Gm44771-201ENSMUST00000206975 626 ntBASIC16.62■□□□□ 0.25
Nkx6-1Q99MA9 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nkx6-1Q99MA9 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nkx6-1Q99MA9 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nkx6-1Q99MA9 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nkx6-1Q99MA9 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Nkx6-1Q99MA9 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Nkx6-1Q99MA9 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nkx6-1Q99MA9 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nkx6-1Q99MA9 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC16.62■□□□□ 0.25
Nkx6-1Q99MA9 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC16.62■□□□□ 0.25
Nkx6-1Q99MA9 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Nkx6-1Q99MA9 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Nkx6-1Q99MA9 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nkx6-1Q99MA9 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Nkx6-1Q99MA9 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Nkx6-1Q99MA9 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC16.61■□□□□ 0.25
Nkx6-1Q99MA9 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC16.61■□□□□ 0.25
Nkx6-1Q99MA9 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Nkx6-1Q99MA9 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Nkx6-1Q99MA9 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Nkx6-1Q99MA9 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC16.61■□□□□ 0.25
Nkx6-1Q99MA9 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC16.61■□□□□ 0.25
Nkx6-1Q99MA9 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC16.61■□□□□ 0.25
Nkx6-1Q99MA9 Gm9013-201ENSMUST00000132939 882 ntBASIC16.61■□□□□ 0.25
Nkx6-1Q99MA9 AC124603.1-201ENSMUST00000223843 308 ntBASIC16.61■□□□□ 0.25
Nkx6-1Q99MA9 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Nkx6-1Q99MA9 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Nkx6-1Q99MA9 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Nkx6-1Q99MA9 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Nkx6-1Q99MA9 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Nkx6-1Q99MA9 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC16.61■□□□□ 0.25
Nkx6-1Q99MA9 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
Nkx6-1Q99MA9 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Nkx6-1Q99MA9 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Nkx6-1Q99MA9 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Nkx6-1Q99MA9 AC108858.1-201ENSMUST00000228461 1498 ntBASIC16.61■□□□□ 0.25
Nkx6-1Q99MA9 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Nkx6-1Q99MA9 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Nkx6-1Q99MA9 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Nkx6-1Q99MA9 Gm18669-201ENSMUST00000216049 778 ntBASIC16.6■□□□□ 0.25
Nkx6-1Q99MA9 Gm7791-201ENSMUST00000219066 539 ntBASIC16.6■□□□□ 0.25
Nkx6-1Q99MA9 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Nkx6-1Q99MA9 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Nkx6-1Q99MA9 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Nkx6-1Q99MA9 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Nkx6-1Q99MA9 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Nkx6-1Q99MA9 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
Nkx6-1Q99MA9 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Nkx6-1Q99MA9 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Nkx6-1Q99MA9 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Nkx6-1Q99MA9 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Nkx6-1Q99MA9 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Nkx6-1Q99MA9 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Nkx6-1Q99MA9 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Nkx6-1Q99MA9 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC16.59■□□□□ 0.25
Nkx6-1Q99MA9 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Nkx6-1Q99MA9 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC16.59■□□□□ 0.25
Nkx6-1Q99MA9 Gm7638-201ENSMUST00000121348 967 ntBASIC16.59■□□□□ 0.25
Nkx6-1Q99MA9 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC16.59■□□□□ 0.25
Nkx6-1Q99MA9 Umpk-ps-201ENSMUST00000211897 827 ntBASIC16.59■□□□□ 0.25
Nkx6-1Q99MA9 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Nkx6-1Q99MA9 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Nkx6-1Q99MA9 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Nkx6-1Q99MA9 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Nkx6-1Q99MA9 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC16.59■□□□□ 0.25
Nkx6-1Q99MA9 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Nkx6-1Q99MA9 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Nkx6-1Q99MA9 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Nkx6-1Q99MA9 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Nkx6-1Q99MA9 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Nkx6-1Q99MA9 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Nkx6-1Q99MA9 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Nkx6-1Q99MA9 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC16.58■□□□□ 0.24
Nkx6-1Q99MA9 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC16.58■□□□□ 0.24
Nkx6-1Q99MA9 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC16.58■□□□□ 0.24
Nkx6-1Q99MA9 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC16.58■□□□□ 0.24
Nkx6-1Q99MA9 Gm17808-201ENSMUST00000200859 894 ntBASIC16.58■□□□□ 0.24
Nkx6-1Q99MA9 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Nkx6-1Q99MA9 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Nkx6-1Q99MA9 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Nkx6-1Q99MA9 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Nkx6-1Q99MA9 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Nkx6-1Q99MA9 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Nkx6-1Q99MA9 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Nkx6-1Q99MA9 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Nkx6-1Q99MA9 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms