Protein–RNA interactions for Protein: Q99LI2

Clcc1, Chloride channel CLIC-like protein 1, mousemouse

Predictions only

Length 539 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcc1Q99LI2 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Clcc1Q99LI2 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Clcc1Q99LI2 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Clcc1Q99LI2 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Clcc1Q99LI2 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Clcc1Q99LI2 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Clcc1Q99LI2 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC17.56■□□□□ 0.4
Clcc1Q99LI2 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Clcc1Q99LI2 Gm38308-201ENSMUST00000194934 1809 ntBASIC17.56■□□□□ 0.4
Clcc1Q99LI2 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Clcc1Q99LI2 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Clcc1Q99LI2 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Clcc1Q99LI2 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Clcc1Q99LI2 Gm12382-201ENSMUST00000122005 922 ntBASIC17.56■□□□□ 0.4
Clcc1Q99LI2 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Clcc1Q99LI2 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Clcc1Q99LI2 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Clcc1Q99LI2 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC17.56■□□□□ 0.4
Clcc1Q99LI2 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Clcc1Q99LI2 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Clcc1Q99LI2 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Clcc1Q99LI2 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC17.56■□□□□ 0.4
Clcc1Q99LI2 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Clcc1Q99LI2 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Clcc1Q99LI2 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Clcc1Q99LI2 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Clcc1Q99LI2 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Clcc1Q99LI2 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Clcc1Q99LI2 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Clcc1Q99LI2 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Clcc1Q99LI2 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Clcc1Q99LI2 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Clcc1Q99LI2 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Clcc1Q99LI2 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Clcc1Q99LI2 Gm7977-201ENSMUST00000193787 748 ntBASIC17.55■□□□□ 0.4
Clcc1Q99LI2 Gm29994-201ENSMUST00000195495 1193 ntBASIC17.55■□□□□ 0.4
Clcc1Q99LI2 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Clcc1Q99LI2 Gm16042-201ENSMUST00000204813 1247 ntBASIC17.55■□□□□ 0.4
Clcc1Q99LI2 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC17.55■□□□□ 0.4
Clcc1Q99LI2 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Clcc1Q99LI2 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Clcc1Q99LI2 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Clcc1Q99LI2 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Clcc1Q99LI2 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Clcc1Q99LI2 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Clcc1Q99LI2 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC17.55■□□□□ 0.4
Clcc1Q99LI2 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Clcc1Q99LI2 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
Clcc1Q99LI2 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Clcc1Q99LI2 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Clcc1Q99LI2 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC17.54■□□□□ 0.4
Clcc1Q99LI2 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Clcc1Q99LI2 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Clcc1Q99LI2 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Clcc1Q99LI2 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Clcc1Q99LI2 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC17.54■□□□□ 0.4
Clcc1Q99LI2 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC17.54■□□□□ 0.4
Clcc1Q99LI2 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC17.54■□□□□ 0.4
Clcc1Q99LI2 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Clcc1Q99LI2 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Clcc1Q99LI2 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Clcc1Q99LI2 Gm9987-201ENSMUST00000069768 567 ntBASIC17.54■□□□□ 0.4
Clcc1Q99LI2 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Clcc1Q99LI2 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Clcc1Q99LI2 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Clcc1Q99LI2 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC17.53■□□□□ 0.4
Clcc1Q99LI2 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Clcc1Q99LI2 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Clcc1Q99LI2 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Clcc1Q99LI2 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC17.53■□□□□ 0.4
Clcc1Q99LI2 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Clcc1Q99LI2 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC17.53■□□□□ 0.4
Clcc1Q99LI2 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Clcc1Q99LI2 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Clcc1Q99LI2 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Clcc1Q99LI2 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Clcc1Q99LI2 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Clcc1Q99LI2 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Clcc1Q99LI2 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Clcc1Q99LI2 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
Clcc1Q99LI2 Gm38345-201ENSMUST00000192635 1748 ntBASIC17.52■□□□□ 0.4
Clcc1Q99LI2 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC17.52■□□□□ 0.4
Clcc1Q99LI2 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Clcc1Q99LI2 Mir6349-201ENSMUST00000184059 97 ntBASIC17.52■□□□□ 0.4
Clcc1Q99LI2 Arhgef4-208ENSMUST00000211073 171 ntBASIC17.52■□□□□ 0.4
Clcc1Q99LI2 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Clcc1Q99LI2 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Clcc1Q99LI2 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Clcc1Q99LI2 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Clcc1Q99LI2 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Clcc1Q99LI2 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Clcc1Q99LI2 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Clcc1Q99LI2 Gm10654-201ENSMUST00000098653 1633 ntBASIC17.51■□□□□ 0.39
Clcc1Q99LI2 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
Clcc1Q99LI2 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
Clcc1Q99LI2 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Clcc1Q99LI2 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Clcc1Q99LI2 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Clcc1Q99LI2 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Clcc1Q99LI2 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 88.8 ms