Protein–RNA interactions for Protein: Q99KG7

Hps4, Hermansky-Pudlak syndrome 4 protein homolog, mousemouse

Predictions only

Length 671 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hps4Q99KG7 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Hps4Q99KG7 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Hps4Q99KG7 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Hps4Q99KG7 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Hps4Q99KG7 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Hps4Q99KG7 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Hps4Q99KG7 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
Hps4Q99KG7 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Hps4Q99KG7 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Hps4Q99KG7 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Hps4Q99KG7 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Hps4Q99KG7 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Hps4Q99KG7 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Hps4Q99KG7 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Hps4Q99KG7 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Hps4Q99KG7 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC20.86■□□□□ 0.93
Hps4Q99KG7 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC20.86■□□□□ 0.93
Hps4Q99KG7 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC20.86■□□□□ 0.93
Hps4Q99KG7 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Hps4Q99KG7 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Hps4Q99KG7 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
Hps4Q99KG7 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Hps4Q99KG7 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Hps4Q99KG7 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Hps4Q99KG7 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC20.85■□□□□ 0.93
Hps4Q99KG7 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Hps4Q99KG7 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Hps4Q99KG7 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Hps4Q99KG7 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Hps4Q99KG7 Gm45058-201ENSMUST00000205810 766 ntBASIC20.85■□□□□ 0.93
Hps4Q99KG7 Gm29791-202ENSMUST00000207888 369 ntBASIC20.85■□□□□ 0.93
Hps4Q99KG7 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC20.85■□□□□ 0.93
Hps4Q99KG7 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC20.85■□□□□ 0.93
Hps4Q99KG7 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Hps4Q99KG7 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC20.85■□□□□ 0.93
Hps4Q99KG7 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Hps4Q99KG7 Fst-202ENSMUST00000223640 2612 ntBASIC20.85■□□□□ 0.93
Hps4Q99KG7 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Hps4Q99KG7 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Hps4Q99KG7 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Hps4Q99KG7 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Hps4Q99KG7 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Hps4Q99KG7 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Hps4Q99KG7 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Hps4Q99KG7 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Hps4Q99KG7 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Hps4Q99KG7 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Hps4Q99KG7 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Hps4Q99KG7 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Hps4Q99KG7 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Hps4Q99KG7 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Hps4Q99KG7 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Hps4Q99KG7 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Hps4Q99KG7 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Hps4Q99KG7 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Hps4Q99KG7 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Hps4Q99KG7 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Hps4Q99KG7 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
Hps4Q99KG7 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Hps4Q99KG7 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Hps4Q99KG7 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
Hps4Q99KG7 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Hps4Q99KG7 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Hps4Q99KG7 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Hps4Q99KG7 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
Hps4Q99KG7 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC20.83■□□□□ 0.93
Hps4Q99KG7 Gm2274-201ENSMUST00000184539 609 ntBASIC20.83■□□□□ 0.93
Hps4Q99KG7 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC20.83■□□□□ 0.93
Hps4Q99KG7 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Hps4Q99KG7 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Hps4Q99KG7 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Hps4Q99KG7 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Hps4Q99KG7 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Hps4Q99KG7 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Hps4Q99KG7 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Hps4Q99KG7 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
Hps4Q99KG7 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Hps4Q99KG7 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Hps4Q99KG7 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Hps4Q99KG7 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Hps4Q99KG7 Gm24841-201ENSMUST00000158676 357 ntBASIC20.82■□□□□ 0.92
Hps4Q99KG7 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Hps4Q99KG7 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Hps4Q99KG7 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Hps4Q99KG7 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Hps4Q99KG7 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Hps4Q99KG7 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Hps4Q99KG7 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
Hps4Q99KG7 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Hps4Q99KG7 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Hps4Q99KG7 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Hps4Q99KG7 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Hps4Q99KG7 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Hps4Q99KG7 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC20.81■□□□□ 0.92
Hps4Q99KG7 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC20.81■□□□□ 0.92
Hps4Q99KG7 Mir5130-201ENSMUST00000175160 84 ntBASIC20.81■□□□□ 0.92
Hps4Q99KG7 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC20.81■□□□□ 0.92
Hps4Q99KG7 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC20.81■□□□□ 0.92
Hps4Q99KG7 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Hps4Q99KG7 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms