Protein–RNA interactions for Protein: Q99JR8

Smarcd2, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2, mousemouse

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd2Q99JR8 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Smarcd2Q99JR8 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Smarcd2Q99JR8 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Smarcd2Q99JR8 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Smarcd2Q99JR8 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Smarcd2Q99JR8 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Smarcd2Q99JR8 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Smarcd2Q99JR8 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
Smarcd2Q99JR8 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Smarcd2Q99JR8 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Smarcd2Q99JR8 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Smarcd2Q99JR8 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Smarcd2Q99JR8 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Smarcd2Q99JR8 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Smarcd2Q99JR8 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Smarcd2Q99JR8 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Smarcd2Q99JR8 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
Smarcd2Q99JR8 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Smarcd2Q99JR8 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Smarcd2Q99JR8 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Smarcd2Q99JR8 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Smarcd2Q99JR8 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
Smarcd2Q99JR8 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Smarcd2Q99JR8 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC17.96■□□□□ 0.46
Smarcd2Q99JR8 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Smarcd2Q99JR8 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Smarcd2Q99JR8 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Smarcd2Q99JR8 Gm14859-201ENSMUST00000117752 357 ntBASIC17.95■□□□□ 0.46
Smarcd2Q99JR8 Gm29791-202ENSMUST00000207888 369 ntBASIC17.95■□□□□ 0.46
Smarcd2Q99JR8 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Smarcd2Q99JR8 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Smarcd2Q99JR8 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Smarcd2Q99JR8 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Smarcd2Q99JR8 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
Smarcd2Q99JR8 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Smarcd2Q99JR8 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC17.94■□□□□ 0.46
Smarcd2Q99JR8 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Smarcd2Q99JR8 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Smarcd2Q99JR8 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Smarcd2Q99JR8 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Smarcd2Q99JR8 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Smarcd2Q99JR8 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Smarcd2Q99JR8 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Smarcd2Q99JR8 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Smarcd2Q99JR8 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Smarcd2Q99JR8 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Smarcd2Q99JR8 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Smarcd2Q99JR8 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Smarcd2Q99JR8 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC17.93■□□□□ 0.46
Smarcd2Q99JR8 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC17.93■□□□□ 0.46
Smarcd2Q99JR8 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC17.93■□□□□ 0.46
Smarcd2Q99JR8 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Smarcd2Q99JR8 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Smarcd2Q99JR8 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Smarcd2Q99JR8 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Smarcd2Q99JR8 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Smarcd2Q99JR8 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Smarcd2Q99JR8 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Smarcd2Q99JR8 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Smarcd2Q99JR8 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Smarcd2Q99JR8 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Smarcd2Q99JR8 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
Smarcd2Q99JR8 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Smarcd2Q99JR8 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Smarcd2Q99JR8 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Smarcd2Q99JR8 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Smarcd2Q99JR8 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Smarcd2Q99JR8 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Smarcd2Q99JR8 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Smarcd2Q99JR8 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Smarcd2Q99JR8 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Smarcd2Q99JR8 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Smarcd2Q99JR8 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Smarcd2Q99JR8 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Smarcd2Q99JR8 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Smarcd2Q99JR8 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC17.92■□□□□ 0.46
Smarcd2Q99JR8 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Smarcd2Q99JR8 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Smarcd2Q99JR8 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Smarcd2Q99JR8 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC17.91■□□□□ 0.46
Smarcd2Q99JR8 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Smarcd2Q99JR8 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Smarcd2Q99JR8 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Smarcd2Q99JR8 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Smarcd2Q99JR8 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Smarcd2Q99JR8 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Smarcd2Q99JR8 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Smarcd2Q99JR8 Gm5784-201ENSMUST00000179344 2478 ntBASIC17.91■□□□□ 0.46
Smarcd2Q99JR8 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Smarcd2Q99JR8 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Smarcd2Q99JR8 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Smarcd2Q99JR8 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Smarcd2Q99JR8 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Smarcd2Q99JR8 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Smarcd2Q99JR8 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC17.9■□□□□ 0.46
Smarcd2Q99JR8 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Smarcd2Q99JR8 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Smarcd2Q99JR8 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Smarcd2Q99JR8 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Smarcd2Q99JR8 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms