Protein–RNA interactions for Protein: Q91Y19

Pcdha11, Protocadherin alpha 11, mousemouse

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha11Q91Y19 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Pcdha11Q91Y19 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdha11Q91Y19 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdha11Q91Y19 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdha11Q91Y19 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdha11Q91Y19 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Pcdha11Q91Y19 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Pcdha11Q91Y19 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdha11Q91Y19 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdha11Q91Y19 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdha11Q91Y19 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdha11Q91Y19 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdha11Q91Y19 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Pcdha11Q91Y19 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdha11Q91Y19 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Pcdha11Q91Y19 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Pcdha11Q91Y19 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdha11Q91Y19 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdha11Q91Y19 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdha11Q91Y19 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdha11Q91Y19 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdha11Q91Y19 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdha11Q91Y19 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdha11Q91Y19 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC18.64■□□□□ 0.58
Pcdha11Q91Y19 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC18.64■□□□□ 0.58
Pcdha11Q91Y19 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Pcdha11Q91Y19 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC18.64■□□□□ 0.57
Pcdha11Q91Y19 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Pcdha11Q91Y19 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Pcdha11Q91Y19 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdha11Q91Y19 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdha11Q91Y19 Gm11643-201ENSMUST00000119578 864 ntBASIC18.64■□□□□ 0.57
Pcdha11Q91Y19 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC18.64■□□□□ 0.57
Pcdha11Q91Y19 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdha11Q91Y19 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdha11Q91Y19 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdha11Q91Y19 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC18.64■□□□□ 0.57
Pcdha11Q91Y19 AC175538.1-201ENSMUST00000225343 1269 ntBASIC18.64■□□□□ 0.57
Pcdha11Q91Y19 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdha11Q91Y19 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdha11Q91Y19 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC18.64■□□□□ 0.57
Pcdha11Q91Y19 Gm37374-201ENSMUST00000194954 1829 ntBASIC18.64■□□□□ 0.57
Pcdha11Q91Y19 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdha11Q91Y19 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdha11Q91Y19 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdha11Q91Y19 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Pcdha11Q91Y19 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC18.63■□□□□ 0.57
Pcdha11Q91Y19 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdha11Q91Y19 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdha11Q91Y19 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdha11Q91Y19 Gm10418-201ENSMUST00000100943 576 ntBASIC18.63■□□□□ 0.57
Pcdha11Q91Y19 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC18.63■□□□□ 0.57
Pcdha11Q91Y19 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC18.63■□□□□ 0.57
Pcdha11Q91Y19 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdha11Q91Y19 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdha11Q91Y19 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdha11Q91Y19 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdha11Q91Y19 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC18.63■□□□□ 0.57
Pcdha11Q91Y19 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdha11Q91Y19 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdha11Q91Y19 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdha11Q91Y19 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdha11Q91Y19 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdha11Q91Y19 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC18.62■□□□□ 0.57
Pcdha11Q91Y19 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Pcdha11Q91Y19 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Pcdha11Q91Y19 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdha11Q91Y19 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Pcdha11Q91Y19 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdha11Q91Y19 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdha11Q91Y19 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdha11Q91Y19 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdha11Q91Y19 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdha11Q91Y19 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdha11Q91Y19 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdha11Q91Y19 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdha11Q91Y19 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdha11Q91Y19 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Pcdha11Q91Y19 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Pcdha11Q91Y19 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdha11Q91Y19 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdha11Q91Y19 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC18.61■□□□□ 0.57
Pcdha11Q91Y19 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdha11Q91Y19 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC18.61■□□□□ 0.57
Pcdha11Q91Y19 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC18.61■□□□□ 0.57
Pcdha11Q91Y19 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdha11Q91Y19 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Pcdha11Q91Y19 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdha11Q91Y19 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdha11Q91Y19 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdha11Q91Y19 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdha11Q91Y19 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdha11Q91Y19 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdha11Q91Y19 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdha11Q91Y19 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdha11Q91Y19 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC18.6■□□□□ 0.57
Pcdha11Q91Y19 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdha11Q91Y19 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdha11Q91Y19 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdha11Q91Y19 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 11.5 ms