Protein–RNA interactions for Protein: Q91XZ9

Pcdhb20, Protocadherin beta 20, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb20Q91XZ9 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhb20Q91XZ9 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhb20Q91XZ9 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC17.07■□□□□ 0.32
Pcdhb20Q91XZ9 CT010486.3-201ENSMUST00000224555 811 ntBASIC17.07■□□□□ 0.32
Pcdhb20Q91XZ9 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhb20Q91XZ9 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Pcdhb20Q91XZ9 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Pcdhb20Q91XZ9 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Pcdhb20Q91XZ9 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhb20Q91XZ9 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhb20Q91XZ9 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhb20Q91XZ9 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhb20Q91XZ9 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhb20Q91XZ9 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhb20Q91XZ9 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC17.06■□□□□ 0.32
Pcdhb20Q91XZ9 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhb20Q91XZ9 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
Pcdhb20Q91XZ9 Gm14913-201ENSMUST00000120011 1093 ntBASIC17.06■□□□□ 0.32
Pcdhb20Q91XZ9 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC17.06■□□□□ 0.32
Pcdhb20Q91XZ9 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC17.06■□□□□ 0.32
Pcdhb20Q91XZ9 Gm18363-201ENSMUST00000221671 730 ntBASIC17.06■□□□□ 0.32
Pcdhb20Q91XZ9 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhb20Q91XZ9 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Pcdhb20Q91XZ9 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhb20Q91XZ9 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhb20Q91XZ9 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhb20Q91XZ9 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Pcdhb20Q91XZ9 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Pcdhb20Q91XZ9 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC17.06■□□□□ 0.32
Pcdhb20Q91XZ9 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC17.06■□□□□ 0.32
Pcdhb20Q91XZ9 Gm13857-203ENSMUST00000150561 2337 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhb20Q91XZ9 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhb20Q91XZ9 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC17.05■□□□□ 0.32
Pcdhb20Q91XZ9 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhb20Q91XZ9 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhb20Q91XZ9 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhb20Q91XZ9 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhb20Q91XZ9 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhb20Q91XZ9 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhb20Q91XZ9 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhb20Q91XZ9 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC17.05■□□□□ 0.32
Pcdhb20Q91XZ9 Gm11643-201ENSMUST00000119578 864 ntBASIC17.05■□□□□ 0.32
Pcdhb20Q91XZ9 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhb20Q91XZ9 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
Pcdhb20Q91XZ9 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC17.05■□□□□ 0.32
Pcdhb20Q91XZ9 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Pcdhb20Q91XZ9 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhb20Q91XZ9 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhb20Q91XZ9 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Pcdhb20Q91XZ9 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhb20Q91XZ9 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Pcdhb20Q91XZ9 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Pcdhb20Q91XZ9 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhb20Q91XZ9 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhb20Q91XZ9 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhb20Q91XZ9 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhb20Q91XZ9 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhb20Q91XZ9 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhb20Q91XZ9 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Pcdhb20Q91XZ9 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhb20Q91XZ9 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhb20Q91XZ9 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhb20Q91XZ9 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhb20Q91XZ9 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhb20Q91XZ9 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhb20Q91XZ9 Gm10418-201ENSMUST00000100943 576 ntBASIC17.04■□□□□ 0.32
Pcdhb20Q91XZ9 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhb20Q91XZ9 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC17.04■□□□□ 0.32
Pcdhb20Q91XZ9 Gm715-201ENSMUST00000117865 831 ntBASIC17.04■□□□□ 0.32
Pcdhb20Q91XZ9 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC17.04■□□□□ 0.32
Pcdhb20Q91XZ9 Gm13263-201ENSMUST00000121271 838 ntBASIC17.04■□□□□ 0.32
Pcdhb20Q91XZ9 Gm13366-201ENSMUST00000122198 970 ntBASIC17.04■□□□□ 0.32
Pcdhb20Q91XZ9 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhb20Q91XZ9 Id2-201ENSMUST00000020974 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhb20Q91XZ9 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhb20Q91XZ9 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhb20Q91XZ9 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhb20Q91XZ9 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhb20Q91XZ9 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhb20Q91XZ9 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhb20Q91XZ9 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Pcdhb20Q91XZ9 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Pcdhb20Q91XZ9 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhb20Q91XZ9 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhb20Q91XZ9 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhb20Q91XZ9 AC122335.2-201ENSMUST00000213901 6181 ntBASIC17.03■□□□□ 0.32
Pcdhb20Q91XZ9 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhb20Q91XZ9 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC17.03■□□□□ 0.32
Pcdhb20Q91XZ9 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC17.03■□□□□ 0.32
Pcdhb20Q91XZ9 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhb20Q91XZ9 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhb20Q91XZ9 Gm7430-201ENSMUST00000193824 1144 ntBASIC17.03■□□□□ 0.32
Pcdhb20Q91XZ9 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhb20Q91XZ9 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhb20Q91XZ9 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Pcdhb20Q91XZ9 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Pcdhb20Q91XZ9 AC238940.1-201ENSMUST00000225106 1858 ntBASIC17.03■□□□□ 0.32
Pcdhb20Q91XZ9 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhb20Q91XZ9 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Pcdhb20Q91XZ9 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms