Protein–RNA interactions for Protein: Q91XZ8

Pcdhb22, Protocadherin beta 22, mousemouse

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb22Q91XZ8 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Pcdhb22Q91XZ8 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Pcdhb22Q91XZ8 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Pcdhb22Q91XZ8 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Pcdhb22Q91XZ8 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Pcdhb22Q91XZ8 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Pcdhb22Q91XZ8 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Pcdhb22Q91XZ8 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Pcdhb22Q91XZ8 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Pcdhb22Q91XZ8 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Pcdhb22Q91XZ8 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Pcdhb22Q91XZ8 Gm6576-201ENSMUST00000169678 883 ntBASIC20.72■□□□□ 0.91
Pcdhb22Q91XZ8 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Pcdhb22Q91XZ8 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC20.72■□□□□ 0.91
Pcdhb22Q91XZ8 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Pcdhb22Q91XZ8 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Pcdhb22Q91XZ8 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC20.72■□□□□ 0.91
Pcdhb22Q91XZ8 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Pcdhb22Q91XZ8 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Pcdhb22Q91XZ8 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Pcdhb22Q91XZ8 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC20.71■□□□□ 0.91
Pcdhb22Q91XZ8 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Pcdhb22Q91XZ8 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Pcdhb22Q91XZ8 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC20.71■□□□□ 0.91
Pcdhb22Q91XZ8 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Pcdhb22Q91XZ8 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Pcdhb22Q91XZ8 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Pcdhb22Q91XZ8 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Pcdhb22Q91XZ8 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Pcdhb22Q91XZ8 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC20.71■□□□□ 0.91
Pcdhb22Q91XZ8 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Pcdhb22Q91XZ8 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
Pcdhb22Q91XZ8 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC20.7■□□□□ 0.9
Pcdhb22Q91XZ8 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Pcdhb22Q91XZ8 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Pcdhb22Q91XZ8 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
Pcdhb22Q91XZ8 Gm12382-201ENSMUST00000122005 922 ntBASIC20.7■□□□□ 0.9
Pcdhb22Q91XZ8 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Pcdhb22Q91XZ8 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Pcdhb22Q91XZ8 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Pcdhb22Q91XZ8 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Pcdhb22Q91XZ8 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Pcdhb22Q91XZ8 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Pcdhb22Q91XZ8 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Pcdhb22Q91XZ8 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Pcdhb22Q91XZ8 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC20.7■□□□□ 0.9
Pcdhb22Q91XZ8 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Pcdhb22Q91XZ8 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Pcdhb22Q91XZ8 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Pcdhb22Q91XZ8 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Pcdhb22Q91XZ8 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Pcdhb22Q91XZ8 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Pcdhb22Q91XZ8 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Pcdhb22Q91XZ8 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC20.69■□□□□ 0.9
Pcdhb22Q91XZ8 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Pcdhb22Q91XZ8 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC20.69■□□□□ 0.9
Pcdhb22Q91XZ8 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Pcdhb22Q91XZ8 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Pcdhb22Q91XZ8 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Pcdhb22Q91XZ8 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Pcdhb22Q91XZ8 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Pcdhb22Q91XZ8 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC20.68■□□□□ 0.9
Pcdhb22Q91XZ8 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Pcdhb22Q91XZ8 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC20.68■□□□□ 0.9
Pcdhb22Q91XZ8 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Pcdhb22Q91XZ8 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC20.68■□□□□ 0.9
Pcdhb22Q91XZ8 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC20.68■□□□□ 0.9
Pcdhb22Q91XZ8 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Pcdhb22Q91XZ8 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Pcdhb22Q91XZ8 Gm8969-201ENSMUST00000199694 526 ntBASIC20.68■□□□□ 0.9
Pcdhb22Q91XZ8 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Pcdhb22Q91XZ8 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Pcdhb22Q91XZ8 AC124581.1-201ENSMUST00000225416 1399 ntBASIC20.68■□□□□ 0.9
Pcdhb22Q91XZ8 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Pcdhb22Q91XZ8 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Pcdhb22Q91XZ8 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC20.67■□□□□ 0.9
Pcdhb22Q91XZ8 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Pcdhb22Q91XZ8 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Pcdhb22Q91XZ8 Mir8112-201ENSMUST00000184382 131 ntBASIC20.67■□□□□ 0.9
Pcdhb22Q91XZ8 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Pcdhb22Q91XZ8 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Pcdhb22Q91XZ8 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC20.67■□□□□ 0.9
Pcdhb22Q91XZ8 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Pcdhb22Q91XZ8 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
Pcdhb22Q91XZ8 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Pcdhb22Q91XZ8 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Pcdhb22Q91XZ8 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Pcdhb22Q91XZ8 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Pcdhb22Q91XZ8 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC20.66■□□□□ 0.9
Pcdhb22Q91XZ8 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC20.66■□□□□ 0.9
Pcdhb22Q91XZ8 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Pcdhb22Q91XZ8 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Pcdhb22Q91XZ8 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Pcdhb22Q91XZ8 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Pcdhb22Q91XZ8 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC20.66■□□□□ 0.9
Pcdhb22Q91XZ8 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Pcdhb22Q91XZ8 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Pcdhb22Q91XZ8 AC154649.1-201ENSMUST00000227392 384 ntBASIC20.66■□□□□ 0.9
Pcdhb22Q91XZ8 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Pcdhb22Q91XZ8 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms