Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdhb3Q91XZ7 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdhb3Q91XZ7 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdhb3Q91XZ7 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC17.71■□□□□ 0.43
Pcdhb3Q91XZ7 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC17.71■□□□□ 0.43
Pcdhb3Q91XZ7 Gm8969-201ENSMUST00000199694 526 ntBASIC17.71■□□□□ 0.43
Pcdhb3Q91XZ7 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdhb3Q91XZ7 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
Pcdhb3Q91XZ7 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC17.71■□□□□ 0.42
Pcdhb3Q91XZ7 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdhb3Q91XZ7 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Pcdhb3Q91XZ7 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdhb3Q91XZ7 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdhb3Q91XZ7 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdhb3Q91XZ7 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdhb3Q91XZ7 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdhb3Q91XZ7 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdhb3Q91XZ7 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdhb3Q91XZ7 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdhb3Q91XZ7 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC17.7■□□□□ 0.42
Pcdhb3Q91XZ7 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdhb3Q91XZ7 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Pcdhb3Q91XZ7 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdhb3Q91XZ7 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Pcdhb3Q91XZ7 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdhb3Q91XZ7 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdhb3Q91XZ7 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC17.69■□□□□ 0.42
Pcdhb3Q91XZ7 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC17.69■□□□□ 0.42
Pcdhb3Q91XZ7 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdhb3Q91XZ7 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdhb3Q91XZ7 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Pcdhb3Q91XZ7 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdhb3Q91XZ7 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdhb3Q91XZ7 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdhb3Q91XZ7 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC17.69■□□□□ 0.42
Pcdhb3Q91XZ7 Gm37179-201ENSMUST00000194862 823 ntBASIC17.69■□□□□ 0.42
Pcdhb3Q91XZ7 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdhb3Q91XZ7 Gm15823-201ENSMUST00000064305 670 ntBASIC17.69■□□□□ 0.42
Pcdhb3Q91XZ7 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Pcdhb3Q91XZ7 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdhb3Q91XZ7 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdhb3Q91XZ7 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdhb3Q91XZ7 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Pcdhb3Q91XZ7 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdhb3Q91XZ7 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdhb3Q91XZ7 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC17.69■□□□□ 0.42
Pcdhb3Q91XZ7 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
Pcdhb3Q91XZ7 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdhb3Q91XZ7 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdhb3Q91XZ7 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdhb3Q91XZ7 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdhb3Q91XZ7 Gm37519-201ENSMUST00000191687 2210 ntBASIC17.68■□□□□ 0.42
Pcdhb3Q91XZ7 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdhb3Q91XZ7 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Pcdhb3Q91XZ7 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdhb3Q91XZ7 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC17.68■□□□□ 0.42
Pcdhb3Q91XZ7 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdhb3Q91XZ7 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Pcdhb3Q91XZ7 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdhb3Q91XZ7 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdhb3Q91XZ7 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC17.68■□□□□ 0.42
Pcdhb3Q91XZ7 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdhb3Q91XZ7 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdhb3Q91XZ7 Gm29257-201ENSMUST00000186115 639 ntBASIC17.68■□□□□ 0.42
Pcdhb3Q91XZ7 Gm29019-202ENSMUST00000188623 564 ntTSL 2 BASIC17.68■□□□□ 0.42
Pcdhb3Q91XZ7 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC17.68■□□□□ 0.42
Pcdhb3Q91XZ7 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdhb3Q91XZ7 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdhb3Q91XZ7 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdhb3Q91XZ7 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdhb3Q91XZ7 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Pcdhb3Q91XZ7 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdhb3Q91XZ7 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdhb3Q91XZ7 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdhb3Q91XZ7 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhb3Q91XZ7 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhb3Q91XZ7 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhb3Q91XZ7 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhb3Q91XZ7 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Pcdhb3Q91XZ7 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhb3Q91XZ7 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhb3Q91XZ7 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhb3Q91XZ7 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhb3Q91XZ7 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhb3Q91XZ7 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhb3Q91XZ7 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhb3Q91XZ7 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Pcdhb3Q91XZ7 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhb3Q91XZ7 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhb3Q91XZ7 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhb3Q91XZ7 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhb3Q91XZ7 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhb3Q91XZ7 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhb3Q91XZ7 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC17.67■□□□□ 0.42
Pcdhb3Q91XZ7 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhb3Q91XZ7 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhb3Q91XZ7 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhb3Q91XZ7 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhb3Q91XZ7 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhb3Q91XZ7 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 63.6 ms