Protein–RNA interactions for Protein: Q91XZ5

Pcdhb5, Protocadherin beta 5, mousemouse

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb5Q91XZ5 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Pcdhb5Q91XZ5 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Pcdhb5Q91XZ5 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
Pcdhb5Q91XZ5 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Pcdhb5Q91XZ5 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Pcdhb5Q91XZ5 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Pcdhb5Q91XZ5 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Pcdhb5Q91XZ5 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC20.94■□□□□ 0.94
Pcdhb5Q91XZ5 Gm24841-201ENSMUST00000158676 357 ntBASIC20.94■□□□□ 0.94
Pcdhb5Q91XZ5 Gm7367-201ENSMUST00000057611 492 ntBASIC20.94■□□□□ 0.94
Pcdhb5Q91XZ5 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Pcdhb5Q91XZ5 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC20.94■□□□□ 0.94
Pcdhb5Q91XZ5 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Pcdhb5Q91XZ5 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
Pcdhb5Q91XZ5 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
Pcdhb5Q91XZ5 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Pcdhb5Q91XZ5 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Pcdhb5Q91XZ5 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
Pcdhb5Q91XZ5 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Pcdhb5Q91XZ5 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Pcdhb5Q91XZ5 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Pcdhb5Q91XZ5 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Pcdhb5Q91XZ5 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Pcdhb5Q91XZ5 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Pcdhb5Q91XZ5 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Pcdhb5Q91XZ5 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC20.93■□□□□ 0.94
Pcdhb5Q91XZ5 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC20.93■□□□□ 0.94
Pcdhb5Q91XZ5 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Pcdhb5Q91XZ5 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Pcdhb5Q91XZ5 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Pcdhb5Q91XZ5 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Pcdhb5Q91XZ5 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Pcdhb5Q91XZ5 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Pcdhb5Q91XZ5 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Pcdhb5Q91XZ5 Gm7638-201ENSMUST00000121348 967 ntBASIC20.92■□□□□ 0.94
Pcdhb5Q91XZ5 Gm4217-201ENSMUST00000182243 1002 ntBASIC20.92■□□□□ 0.94
Pcdhb5Q91XZ5 Gm29791-202ENSMUST00000207888 369 ntBASIC20.92■□□□□ 0.94
Pcdhb5Q91XZ5 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Pcdhb5Q91XZ5 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Pcdhb5Q91XZ5 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC20.92■□□□□ 0.94
Pcdhb5Q91XZ5 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Pcdhb5Q91XZ5 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
Pcdhb5Q91XZ5 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Pcdhb5Q91XZ5 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC20.92■□□□□ 0.94
Pcdhb5Q91XZ5 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Pcdhb5Q91XZ5 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Pcdhb5Q91XZ5 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Pcdhb5Q91XZ5 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Pcdhb5Q91XZ5 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Pcdhb5Q91XZ5 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Pcdhb5Q91XZ5 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Pcdhb5Q91XZ5 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
Pcdhb5Q91XZ5 Gm6728-201ENSMUST00000178117 1065 ntBASIC20.91■□□□□ 0.94
Pcdhb5Q91XZ5 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
Pcdhb5Q91XZ5 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Pcdhb5Q91XZ5 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Pcdhb5Q91XZ5 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC20.91■□□□□ 0.94
Pcdhb5Q91XZ5 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Pcdhb5Q91XZ5 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Pcdhb5Q91XZ5 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Pcdhb5Q91XZ5 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Pcdhb5Q91XZ5 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Pcdhb5Q91XZ5 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
Pcdhb5Q91XZ5 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
Pcdhb5Q91XZ5 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Pcdhb5Q91XZ5 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Pcdhb5Q91XZ5 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Pcdhb5Q91XZ5 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Pcdhb5Q91XZ5 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Pcdhb5Q91XZ5 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Pcdhb5Q91XZ5 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Pcdhb5Q91XZ5 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Pcdhb5Q91XZ5 Gm38342-201ENSMUST00000195710 2980 ntBASIC20.9■□□□□ 0.94
Pcdhb5Q91XZ5 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Pcdhb5Q91XZ5 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Pcdhb5Q91XZ5 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Pcdhb5Q91XZ5 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Pcdhb5Q91XZ5 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Pcdhb5Q91XZ5 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Pcdhb5Q91XZ5 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC20.9■□□□□ 0.94
Pcdhb5Q91XZ5 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Pcdhb5Q91XZ5 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Pcdhb5Q91XZ5 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Pcdhb5Q91XZ5 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Pcdhb5Q91XZ5 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Pcdhb5Q91XZ5 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Pcdhb5Q91XZ5 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Pcdhb5Q91XZ5 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Pcdhb5Q91XZ5 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Pcdhb5Q91XZ5 AA414768-201ENSMUST00000121924 1257 ntBASIC20.89■□□□□ 0.93
Pcdhb5Q91XZ5 Gm22697-201ENSMUST00000175194 63 ntBASIC20.89■□□□□ 0.93
Pcdhb5Q91XZ5 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC20.89■□□□□ 0.93
Pcdhb5Q91XZ5 Gm10819-201ENSMUST00000099988 561 ntBASIC20.89■□□□□ 0.93
Pcdhb5Q91XZ5 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Pcdhb5Q91XZ5 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC20.89■□□□□ 0.93
Pcdhb5Q91XZ5 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
Pcdhb5Q91XZ5 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Pcdhb5Q91XZ5 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Pcdhb5Q91XZ5 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Pcdhb5Q91XZ5 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms