Protein–RNA interactions for Protein: Q91XZ4

Pcdhb6, Protocadherin beta-6, mousemouse

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb6Q91XZ4 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdhb6Q91XZ4 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Pcdhb6Q91XZ4 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC18.27■□□□□ 0.51
Pcdhb6Q91XZ4 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhb6Q91XZ4 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC18.26■□□□□ 0.51
Pcdhb6Q91XZ4 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhb6Q91XZ4 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC18.26■□□□□ 0.51
Pcdhb6Q91XZ4 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhb6Q91XZ4 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhb6Q91XZ4 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
Pcdhb6Q91XZ4 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhb6Q91XZ4 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Pcdhb6Q91XZ4 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Pcdhb6Q91XZ4 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhb6Q91XZ4 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhb6Q91XZ4 Gm12527-201ENSMUST00000117967 564 ntBASIC18.26■□□□□ 0.51
Pcdhb6Q91XZ4 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC18.26■□□□□ 0.51
Pcdhb6Q91XZ4 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhb6Q91XZ4 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhb6Q91XZ4 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhb6Q91XZ4 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhb6Q91XZ4 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhb6Q91XZ4 Gm10654-201ENSMUST00000098653 1633 ntBASIC18.26■□□□□ 0.51
Pcdhb6Q91XZ4 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC18.25■□□□□ 0.51
Pcdhb6Q91XZ4 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdhb6Q91XZ4 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC18.25■□□□□ 0.51
Pcdhb6Q91XZ4 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdhb6Q91XZ4 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Pcdhb6Q91XZ4 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdhb6Q91XZ4 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC18.25■□□□□ 0.51
Pcdhb6Q91XZ4 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdhb6Q91XZ4 Gm27275-201ENSMUST00000184318 272 ntBASIC18.25■□□□□ 0.51
Pcdhb6Q91XZ4 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdhb6Q91XZ4 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdhb6Q91XZ4 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdhb6Q91XZ4 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdhb6Q91XZ4 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdhb6Q91XZ4 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdhb6Q91XZ4 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdhb6Q91XZ4 Gm37820-201ENSMUST00000194021 2147 ntBASIC18.25■□□□□ 0.51
Pcdhb6Q91XZ4 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhb6Q91XZ4 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC18.24■□□□□ 0.51
Pcdhb6Q91XZ4 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC18.24■□□□□ 0.51
Pcdhb6Q91XZ4 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhb6Q91XZ4 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhb6Q91XZ4 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC18.24■□□□□ 0.51
Pcdhb6Q91XZ4 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC18.24■□□□□ 0.51
Pcdhb6Q91XZ4 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhb6Q91XZ4 Gm15375-201ENSMUST00000119510 849 ntBASIC18.24■□□□□ 0.51
Pcdhb6Q91XZ4 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhb6Q91XZ4 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC18.24■□□□□ 0.51
Pcdhb6Q91XZ4 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Pcdhb6Q91XZ4 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhb6Q91XZ4 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC18.24■□□□□ 0.51
Pcdhb6Q91XZ4 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhb6Q91XZ4 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhb6Q91XZ4 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC18.23■□□□□ 0.51
Pcdhb6Q91XZ4 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Pcdhb6Q91XZ4 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhb6Q91XZ4 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Pcdhb6Q91XZ4 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhb6Q91XZ4 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhb6Q91XZ4 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhb6Q91XZ4 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhb6Q91XZ4 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC18.23■□□□□ 0.51
Pcdhb6Q91XZ4 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC18.23■□□□□ 0.51
Pcdhb6Q91XZ4 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhb6Q91XZ4 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhb6Q91XZ4 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhb6Q91XZ4 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC18.23■□□□□ 0.51
Pcdhb6Q91XZ4 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhb6Q91XZ4 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhb6Q91XZ4 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhb6Q91XZ4 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhb6Q91XZ4 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhb6Q91XZ4 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhb6Q91XZ4 Gm45560-201ENSMUST00000211492 1472 ntBASIC18.22■□□□□ 0.51
Pcdhb6Q91XZ4 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdhb6Q91XZ4 Gm11643-201ENSMUST00000119578 864 ntBASIC18.22■□□□□ 0.51
Pcdhb6Q91XZ4 Gm13158-201ENSMUST00000122007 736 ntBASIC18.22■□□□□ 0.51
Pcdhb6Q91XZ4 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC18.22■□□□□ 0.51
Pcdhb6Q91XZ4 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC18.22■□□□□ 0.51
Pcdhb6Q91XZ4 Mir8112-201ENSMUST00000184382 131 ntBASIC18.22■□□□□ 0.51
Pcdhb6Q91XZ4 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdhb6Q91XZ4 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
Pcdhb6Q91XZ4 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Pcdhb6Q91XZ4 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdhb6Q91XZ4 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdhb6Q91XZ4 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdhb6Q91XZ4 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdhb6Q91XZ4 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC18.22■□□□□ 0.51
Pcdhb6Q91XZ4 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdhb6Q91XZ4 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdhb6Q91XZ4 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdhb6Q91XZ4 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdhb6Q91XZ4 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdhb6Q91XZ4 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdhb6Q91XZ4 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC18.21■□□□□ 0.51
Pcdhb6Q91XZ4 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC18.21■□□□□ 0.51
Pcdhb6Q91XZ4 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms