Protein–RNA interactions for Protein: Q91XX7

Pcdhgb2, Protocadherin gamma B2, mousemouse

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb2Q91XX7 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhgb2Q91XX7 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhgb2Q91XX7 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Pcdhgb2Q91XX7 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhgb2Q91XX7 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhgb2Q91XX7 Gm37194-201ENSMUST00000193092 3031 ntBASIC16.72■□□□□ 0.27
Pcdhgb2Q91XX7 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhgb2Q91XX7 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhgb2Q91XX7 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhgb2Q91XX7 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
Pcdhgb2Q91XX7 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC16.72■□□□□ 0.27
Pcdhgb2Q91XX7 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhgb2Q91XX7 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhgb2Q91XX7 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhgb2Q91XX7 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhgb2Q91XX7 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhgb2Q91XX7 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhgb2Q91XX7 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhgb2Q91XX7 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhgb2Q91XX7 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhgb2Q91XX7 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhgb2Q91XX7 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhgb2Q91XX7 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Pcdhgb2Q91XX7 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhgb2Q91XX7 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhgb2Q91XX7 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhgb2Q91XX7 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhgb2Q91XX7 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
Pcdhgb2Q91XX7 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhgb2Q91XX7 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhgb2Q91XX7 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhgb2Q91XX7 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhgb2Q91XX7 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhgb2Q91XX7 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC16.71■□□□□ 0.27
Pcdhgb2Q91XX7 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhgb2Q91XX7 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhgb2Q91XX7 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Pcdhgb2Q91XX7 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhgb2Q91XX7 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Pcdhgb2Q91XX7 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Pcdhgb2Q91XX7 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.26
Pcdhgb2Q91XX7 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhgb2Q91XX7 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhgb2Q91XX7 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhgb2Q91XX7 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Pcdhgb2Q91XX7 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhgb2Q91XX7 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Pcdhgb2Q91XX7 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhgb2Q91XX7 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhgb2Q91XX7 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhgb2Q91XX7 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhgb2Q91XX7 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC16.7■□□□□ 0.26
Pcdhgb2Q91XX7 AC131586.2-201ENSMUST00000228370 1512 ntBASIC16.7■□□□□ 0.26
Pcdhgb2Q91XX7 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhgb2Q91XX7 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhgb2Q91XX7 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Pcdhgb2Q91XX7 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Pcdhgb2Q91XX7 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhgb2Q91XX7 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhgb2Q91XX7 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhgb2Q91XX7 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC16.69■□□□□ 0.26
Pcdhgb2Q91XX7 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhgb2Q91XX7 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Pcdhgb2Q91XX7 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhgb2Q91XX7 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Pcdhgb2Q91XX7 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhgb2Q91XX7 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhgb2Q91XX7 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhgb2Q91XX7 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhgb2Q91XX7 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC16.69■□□□□ 0.26
Pcdhgb2Q91XX7 Gm43294-201ENSMUST00000202850 2490 ntBASIC16.69■□□□□ 0.26
Pcdhgb2Q91XX7 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC16.69■□□□□ 0.26
Pcdhgb2Q91XX7 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhgb2Q91XX7 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhgb2Q91XX7 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhgb2Q91XX7 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Pcdhgb2Q91XX7 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhgb2Q91XX7 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhgb2Q91XX7 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
Pcdhgb2Q91XX7 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhgb2Q91XX7 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhgb2Q91XX7 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
Pcdhgb2Q91XX7 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC16.68■□□□□ 0.26
Pcdhgb2Q91XX7 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC16.68■□□□□ 0.26
Pcdhgb2Q91XX7 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC16.68■□□□□ 0.26
Pcdhgb2Q91XX7 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhgb2Q91XX7 Gm43808-201ENSMUST00000202534 2065 ntBASIC16.68■□□□□ 0.26
Pcdhgb2Q91XX7 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhgb2Q91XX7 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC16.68■□□□□ 0.26
Pcdhgb2Q91XX7 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhgb2Q91XX7 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhgb2Q91XX7 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhgb2Q91XX7 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC16.67■□□□□ 0.26
Pcdhgb2Q91XX7 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhgb2Q91XX7 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
Pcdhgb2Q91XX7 Gm13234-201ENSMUST00000120010 747 ntBASIC16.67■□□□□ 0.26
Pcdhgb2Q91XX7 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC16.67■□□□□ 0.26
Pcdhgb2Q91XX7 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
Pcdhgb2Q91XX7 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhgb2Q91XX7 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms