Protein–RNA interactions for Protein: Q91VD8

Pcdhb17, MCG141290, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb17Q91VD8 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhb17Q91VD8 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhb17Q91VD8 Gm5828-201ENSMUST00000071842 1860 ntBASIC18.38■□□□□ 0.53
Pcdhb17Q91VD8 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC18.38■□□□□ 0.53
Pcdhb17Q91VD8 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhb17Q91VD8 Gm12849-201ENSMUST00000120013 739 ntBASIC18.38■□□□□ 0.53
Pcdhb17Q91VD8 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC18.38■□□□□ 0.53
Pcdhb17Q91VD8 AC166341.7-201ENSMUST00000221698 126 ntBASIC18.38■□□□□ 0.53
Pcdhb17Q91VD8 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhb17Q91VD8 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhb17Q91VD8 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhb17Q91VD8 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC18.38■□□□□ 0.53
Pcdhb17Q91VD8 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC18.38■□□□□ 0.53
Pcdhb17Q91VD8 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhb17Q91VD8 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhb17Q91VD8 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC18.38■□□□□ 0.53
Pcdhb17Q91VD8 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhb17Q91VD8 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhb17Q91VD8 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhb17Q91VD8 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhb17Q91VD8 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC18.37■□□□□ 0.53
Pcdhb17Q91VD8 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC18.37■□□□□ 0.53
Pcdhb17Q91VD8 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC18.37■□□□□ 0.53
Pcdhb17Q91VD8 Gm14363-201ENSMUST00000122304 409 ntBASIC18.37■□□□□ 0.53
Pcdhb17Q91VD8 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhb17Q91VD8 Gm42545-201ENSMUST00000202755 922 ntBASIC18.37■□□□□ 0.53
Pcdhb17Q91VD8 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC18.37■□□□□ 0.53
Pcdhb17Q91VD8 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhb17Q91VD8 AC154248.2-201ENSMUST00000221964 659 ntTSL 5 BASIC18.37■□□□□ 0.53
Pcdhb17Q91VD8 AC102523.2-201ENSMUST00000227813 983 ntBASIC18.37■□□□□ 0.53
Pcdhb17Q91VD8 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhb17Q91VD8 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhb17Q91VD8 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhb17Q91VD8 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhb17Q91VD8 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhb17Q91VD8 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhb17Q91VD8 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhb17Q91VD8 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhb17Q91VD8 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
Pcdhb17Q91VD8 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdhb17Q91VD8 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdhb17Q91VD8 Gm37292-201ENSMUST00000192062 758 ntBASIC18.36■□□□□ 0.53
Pcdhb17Q91VD8 Gm29791-202ENSMUST00000207888 369 ntBASIC18.36■□□□□ 0.53
Pcdhb17Q91VD8 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdhb17Q91VD8 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdhb17Q91VD8 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdhb17Q91VD8 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdhb17Q91VD8 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdhb17Q91VD8 Gm10812-201ENSMUST00000099864 546 ntBASIC18.36■□□□□ 0.53
Pcdhb17Q91VD8 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdhb17Q91VD8 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Pcdhb17Q91VD8 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdhb17Q91VD8 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdhb17Q91VD8 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdhb17Q91VD8 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC18.35■□□□□ 0.53
Pcdhb17Q91VD8 1110059E24Rik-205ENSMUST00000178523 629 ntTSL 3 BASIC18.35■□□□□ 0.53
Pcdhb17Q91VD8 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC18.35■□□□□ 0.53
Pcdhb17Q91VD8 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdhb17Q91VD8 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdhb17Q91VD8 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC18.35■□□□□ 0.53
Pcdhb17Q91VD8 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdhb17Q91VD8 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdhb17Q91VD8 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdhb17Q91VD8 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdhb17Q91VD8 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdhb17Q91VD8 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdhb17Q91VD8 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdhb17Q91VD8 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdhb17Q91VD8 AC153961.1-201ENSMUST00000217760 385 ntBASIC18.34■□□□□ 0.53
Pcdhb17Q91VD8 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC18.34■□□□□ 0.53
Pcdhb17Q91VD8 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdhb17Q91VD8 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdhb17Q91VD8 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdhb17Q91VD8 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdhb17Q91VD8 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdhb17Q91VD8 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC18.34■□□□□ 0.53
Pcdhb17Q91VD8 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdhb17Q91VD8 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdhb17Q91VD8 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdhb17Q91VD8 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Pcdhb17Q91VD8 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC18.33■□□□□ 0.53
Pcdhb17Q91VD8 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
Pcdhb17Q91VD8 Idnk-204ENSMUST00000226010 1898 ntBASIC18.33■□□□□ 0.53
Pcdhb17Q91VD8 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Pcdhb17Q91VD8 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Pcdhb17Q91VD8 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC18.33■□□□□ 0.52
Pcdhb17Q91VD8 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Pcdhb17Q91VD8 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Pcdhb17Q91VD8 Gm43183-201ENSMUST00000200632 547 ntBASIC18.33■□□□□ 0.52
Pcdhb17Q91VD8 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Pcdhb17Q91VD8 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Pcdhb17Q91VD8 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Pcdhb17Q91VD8 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdhb17Q91VD8 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdhb17Q91VD8 Gm37820-201ENSMUST00000194021 2147 ntBASIC18.32■□□□□ 0.52
Pcdhb17Q91VD8 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdhb17Q91VD8 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdhb17Q91VD8 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdhb17Q91VD8 Gm16275-201ENSMUST00000147774 712 ntTSL 3 BASIC18.32■□□□□ 0.52
Pcdhb17Q91VD8 AC142191.1-201ENSMUST00000219217 699 ntTSL 5 BASIC18.32■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms