Protein–RNA interactions for Protein: Q91UZ8

Pcdhb11, MCG141285, mousemouse

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb11Q91UZ8 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Pcdhb11Q91UZ8 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.5
Pcdhb11Q91UZ8 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
Pcdhb11Q91UZ8 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
Pcdhb11Q91UZ8 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdhb11Q91UZ8 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdhb11Q91UZ8 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC18.2■□□□□ 0.5
Pcdhb11Q91UZ8 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdhb11Q91UZ8 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdhb11Q91UZ8 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdhb11Q91UZ8 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdhb11Q91UZ8 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
Pcdhb11Q91UZ8 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC18.2■□□□□ 0.5
Pcdhb11Q91UZ8 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC18.2■□□□□ 0.5
Pcdhb11Q91UZ8 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdhb11Q91UZ8 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdhb11Q91UZ8 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC18.2■□□□□ 0.5
Pcdhb11Q91UZ8 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdhb11Q91UZ8 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdhb11Q91UZ8 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdhb11Q91UZ8 AC108858.1-201ENSMUST00000228461 1498 ntBASIC18.2■□□□□ 0.5
Pcdhb11Q91UZ8 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdhb11Q91UZ8 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdhb11Q91UZ8 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Pcdhb11Q91UZ8 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdhb11Q91UZ8 Gm15375-201ENSMUST00000119510 849 ntBASIC18.19■□□□□ 0.5
Pcdhb11Q91UZ8 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdhb11Q91UZ8 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdhb11Q91UZ8 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdhb11Q91UZ8 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdhb11Q91UZ8 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdhb11Q91UZ8 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdhb11Q91UZ8 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdhb11Q91UZ8 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC18.19■□□□□ 0.5
Pcdhb11Q91UZ8 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdhb11Q91UZ8 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdhb11Q91UZ8 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdhb11Q91UZ8 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdhb11Q91UZ8 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdhb11Q91UZ8 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdhb11Q91UZ8 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdhb11Q91UZ8 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC18.18■□□□□ 0.5
Pcdhb11Q91UZ8 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdhb11Q91UZ8 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdhb11Q91UZ8 Gm5643-201ENSMUST00000117081 966 ntBASIC18.18■□□□□ 0.5
Pcdhb11Q91UZ8 Mir6349-201ENSMUST00000184059 97 ntBASIC18.18■□□□□ 0.5
Pcdhb11Q91UZ8 Gm18666-201ENSMUST00000190039 958 ntBASIC18.18■□□□□ 0.5
Pcdhb11Q91UZ8 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdhb11Q91UZ8 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Pcdhb11Q91UZ8 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdhb11Q91UZ8 Gm45560-201ENSMUST00000211492 1472 ntBASIC18.18■□□□□ 0.5
Pcdhb11Q91UZ8 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdhb11Q91UZ8 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdhb11Q91UZ8 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdhb11Q91UZ8 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
Pcdhb11Q91UZ8 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhb11Q91UZ8 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhb11Q91UZ8 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhb11Q91UZ8 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhb11Q91UZ8 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhb11Q91UZ8 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhb11Q91UZ8 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC18.17■□□□□ 0.5
Pcdhb11Q91UZ8 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhb11Q91UZ8 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC18.17■□□□□ 0.5
Pcdhb11Q91UZ8 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Pcdhb11Q91UZ8 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Pcdhb11Q91UZ8 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhb11Q91UZ8 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhb11Q91UZ8 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC18.17■□□□□ 0.5
Pcdhb11Q91UZ8 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhb11Q91UZ8 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhb11Q91UZ8 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhb11Q91UZ8 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Pcdhb11Q91UZ8 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhb11Q91UZ8 Gm10654-201ENSMUST00000098653 1633 ntBASIC18.16■□□□□ 0.5
Pcdhb11Q91UZ8 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhb11Q91UZ8 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Pcdhb11Q91UZ8 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhb11Q91UZ8 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC18.16■□□□□ 0.5
Pcdhb11Q91UZ8 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhb11Q91UZ8 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhb11Q91UZ8 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC18.16■□□□□ 0.5
Pcdhb11Q91UZ8 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhb11Q91UZ8 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhb11Q91UZ8 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhb11Q91UZ8 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhb11Q91UZ8 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhb11Q91UZ8 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhb11Q91UZ8 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Pcdhb11Q91UZ8 Dmtn-207ENSMUST00000228001 2437 ntBASIC18.15■□□□□ 0.5
Pcdhb11Q91UZ8 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC18.15■□□□□ 0.5
Pcdhb11Q91UZ8 Nrn1-203ENSMUST00000223611 1443 ntBASIC18.15■□□□□ 0.5
Pcdhb11Q91UZ8 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdhb11Q91UZ8 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdhb11Q91UZ8 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC18.15■□□□□ 0.5
Pcdhb11Q91UZ8 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdhb11Q91UZ8 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Pcdhb11Q91UZ8 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdhb11Q91UZ8 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC18.15■□□□□ 0.5
Pcdhb11Q91UZ8 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms