Protein–RNA interactions for Protein: Q8VIG6

Traip, E3 ubiquitin-protein ligase TRAIP, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TraipQ8VIG6 AC159205.6-201ENSMUST00000224935 887 ntBASIC18.89■□□□□ 0.61
TraipQ8VIG6 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
TraipQ8VIG6 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
TraipQ8VIG6 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
TraipQ8VIG6 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
TraipQ8VIG6 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
TraipQ8VIG6 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TraipQ8VIG6 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC18.89■□□□□ 0.61
TraipQ8VIG6 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
TraipQ8VIG6 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TraipQ8VIG6 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
TraipQ8VIG6 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TraipQ8VIG6 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TraipQ8VIG6 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
TraipQ8VIG6 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TraipQ8VIG6 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
TraipQ8VIG6 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TraipQ8VIG6 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TraipQ8VIG6 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TraipQ8VIG6 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TraipQ8VIG6 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TraipQ8VIG6 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
TraipQ8VIG6 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TraipQ8VIG6 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
TraipQ8VIG6 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
TraipQ8VIG6 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
TraipQ8VIG6 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TraipQ8VIG6 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TraipQ8VIG6 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TraipQ8VIG6 Gm37820-201ENSMUST00000194021 2147 ntBASIC18.88■□□□□ 0.61
TraipQ8VIG6 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TraipQ8VIG6 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
TraipQ8VIG6 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
TraipQ8VIG6 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
TraipQ8VIG6 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TraipQ8VIG6 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TraipQ8VIG6 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
TraipQ8VIG6 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TraipQ8VIG6 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
TraipQ8VIG6 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
TraipQ8VIG6 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TraipQ8VIG6 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
TraipQ8VIG6 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
TraipQ8VIG6 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TraipQ8VIG6 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TraipQ8VIG6 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC18.86■□□□□ 0.61
TraipQ8VIG6 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TraipQ8VIG6 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TraipQ8VIG6 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TraipQ8VIG6 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TraipQ8VIG6 Gm45058-201ENSMUST00000205810 766 ntBASIC18.86■□□□□ 0.61
TraipQ8VIG6 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TraipQ8VIG6 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC18.86■□□□□ 0.61
TraipQ8VIG6 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TraipQ8VIG6 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TraipQ8VIG6 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TraipQ8VIG6 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
TraipQ8VIG6 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TraipQ8VIG6 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TraipQ8VIG6 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TraipQ8VIG6 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
TraipQ8VIG6 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC18.85■□□□□ 0.61
TraipQ8VIG6 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TraipQ8VIG6 Gm18959-201ENSMUST00000208954 655 ntBASIC18.85■□□□□ 0.61
TraipQ8VIG6 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TraipQ8VIG6 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TraipQ8VIG6 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TraipQ8VIG6 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TraipQ8VIG6 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TraipQ8VIG6 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
TraipQ8VIG6 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
TraipQ8VIG6 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
TraipQ8VIG6 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TraipQ8VIG6 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
TraipQ8VIG6 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TraipQ8VIG6 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TraipQ8VIG6 Gm2274-201ENSMUST00000184539 609 ntBASIC18.84■□□□□ 0.61
TraipQ8VIG6 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
TraipQ8VIG6 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TraipQ8VIG6 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TraipQ8VIG6 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
TraipQ8VIG6 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TraipQ8VIG6 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TraipQ8VIG6 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TraipQ8VIG6 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TraipQ8VIG6 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
TraipQ8VIG6 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
TraipQ8VIG6 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
TraipQ8VIG6 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
TraipQ8VIG6 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
TraipQ8VIG6 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
TraipQ8VIG6 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
TraipQ8VIG6 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
TraipQ8VIG6 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC18.83■□□□□ 0.6
TraipQ8VIG6 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
TraipQ8VIG6 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TraipQ8VIG6 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC18.83■□□□□ 0.6
TraipQ8VIG6 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TraipQ8VIG6 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC18.83■□□□□ 0.6
TraipQ8VIG6 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC18.83■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms