Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC18.38■□□□□ 0.53
Trim60Q8VI40 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trim60Q8VI40 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trim60Q8VI40 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Trim60Q8VI40 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Trim60Q8VI40 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trim60Q8VI40 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trim60Q8VI40 Gm44544-201ENSMUST00000207052 1844 ntBASIC18.37■□□□□ 0.53
Trim60Q8VI40 Idnk-204ENSMUST00000226010 1898 ntBASIC18.37■□□□□ 0.53
Trim60Q8VI40 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trim60Q8VI40 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trim60Q8VI40 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC18.37■□□□□ 0.53
Trim60Q8VI40 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC18.37■□□□□ 0.53
Trim60Q8VI40 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC18.37■□□□□ 0.53
Trim60Q8VI40 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trim60Q8VI40 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trim60Q8VI40 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trim60Q8VI40 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trim60Q8VI40 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trim60Q8VI40 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Trim60Q8VI40 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trim60Q8VI40 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Trim60Q8VI40 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Trim60Q8VI40 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trim60Q8VI40 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trim60Q8VI40 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trim60Q8VI40 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trim60Q8VI40 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Trim60Q8VI40 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
Trim60Q8VI40 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC18.36■□□□□ 0.53
Trim60Q8VI40 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trim60Q8VI40 Gm42642-201ENSMUST00000200683 355 ntBASIC18.36■□□□□ 0.53
Trim60Q8VI40 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trim60Q8VI40 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trim60Q8VI40 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Trim60Q8VI40 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trim60Q8VI40 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trim60Q8VI40 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trim60Q8VI40 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim60Q8VI40 Gm5898-201ENSMUST00000121016 2071 ntBASIC18.35■□□□□ 0.53
Trim60Q8VI40 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim60Q8VI40 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim60Q8VI40 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC18.35■□□□□ 0.53
Trim60Q8VI40 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim60Q8VI40 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim60Q8VI40 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Trim60Q8VI40 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC18.35■□□□□ 0.53
Trim60Q8VI40 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim60Q8VI40 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim60Q8VI40 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim60Q8VI40 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC18.35■□□□□ 0.53
Trim60Q8VI40 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC18.35■□□□□ 0.53
Trim60Q8VI40 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim60Q8VI40 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim60Q8VI40 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC18.35■□□□□ 0.53
Trim60Q8VI40 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim60Q8VI40 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim60Q8VI40 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Trim60Q8VI40 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trim60Q8VI40 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Trim60Q8VI40 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Trim60Q8VI40 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC18.34■□□□□ 0.53
Trim60Q8VI40 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trim60Q8VI40 Gm13509-201ENSMUST00000119733 1308 ntBASIC18.34■□□□□ 0.53
Trim60Q8VI40 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Trim60Q8VI40 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Trim60Q8VI40 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC18.34■□□□□ 0.53
Trim60Q8VI40 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC18.34■□□□□ 0.53
Trim60Q8VI40 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC18.34■□□□□ 0.53
Trim60Q8VI40 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC18.34■□□□□ 0.53
Trim60Q8VI40 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC18.34■□□□□ 0.53
Trim60Q8VI40 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Trim60Q8VI40 Gm37194-201ENSMUST00000193092 3031 ntBASIC18.34■□□□□ 0.53
Trim60Q8VI40 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trim60Q8VI40 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trim60Q8VI40 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trim60Q8VI40 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trim60Q8VI40 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Trim60Q8VI40 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trim60Q8VI40 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trim60Q8VI40 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trim60Q8VI40 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trim60Q8VI40 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Trim60Q8VI40 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Trim60Q8VI40 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Trim60Q8VI40 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Trim60Q8VI40 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Trim60Q8VI40 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Trim60Q8VI40 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
Trim60Q8VI40 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Trim60Q8VI40 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trim60Q8VI40 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trim60Q8VI40 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trim60Q8VI40 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Trim60Q8VI40 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC18.33■□□□□ 0.52
Trim60Q8VI40 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trim60Q8VI40 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trim60Q8VI40 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Trim60Q8VI40 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Trim60Q8VI40 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC18.32■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms