Protein–RNA interactions for Protein: Q8VDP2

UPF0428 protein CXorf56 homolog, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q8VDP2 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC17.33■□□□□ 0.36
Q8VDP2 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Q8VDP2 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Q8VDP2 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Q8VDP2 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Q8VDP2 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Q8VDP2 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Q8VDP2 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Q8VDP2 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Q8VDP2 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Q8VDP2 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Q8VDP2 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Q8VDP2 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Q8VDP2 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Q8VDP2 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Q8VDP2 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Q8VDP2 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Q8VDP2 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Q8VDP2 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC17.32■□□□□ 0.36
Q8VDP2 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC17.32■□□□□ 0.36
Q8VDP2 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
Q8VDP2 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Q8VDP2 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Q8VDP2 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Q8VDP2 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Q8VDP2 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Q8VDP2 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Q8VDP2 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Q8VDP2 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Q8VDP2 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Q8VDP2 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Q8VDP2 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
Q8VDP2 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Q8VDP2 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Q8VDP2 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Q8VDP2 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Q8VDP2 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Q8VDP2 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Q8VDP2 Gm37519-201ENSMUST00000191687 2210 ntBASIC17.31■□□□□ 0.36
Q8VDP2 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Q8VDP2 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC17.31■□□□□ 0.36
Q8VDP2 Gm40881-201ENSMUST00000223397 166 ntBASIC17.31■□□□□ 0.36
Q8VDP2 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Q8VDP2 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Q8VDP2 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Q8VDP2 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Q8VDP2 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Q8VDP2 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Q8VDP2 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Q8VDP2 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Q8VDP2 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Q8VDP2 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Q8VDP2 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Q8VDP2 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Q8VDP2 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Q8VDP2 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
Q8VDP2 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Q8VDP2 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Q8VDP2 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Q8VDP2 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Q8VDP2 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Q8VDP2 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC17.3■□□□□ 0.36
Q8VDP2 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Q8VDP2 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC17.3■□□□□ 0.36
Q8VDP2 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC17.3■□□□□ 0.36
Q8VDP2 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Q8VDP2 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Q8VDP2 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Q8VDP2 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
Q8VDP2 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Q8VDP2 Gm19430-201ENSMUST00000193847 2137 ntBASIC17.3■□□□□ 0.36
Q8VDP2 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC17.3■□□□□ 0.36
Q8VDP2 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Q8VDP2 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC17.3■□□□□ 0.36
Q8VDP2 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Q8VDP2 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Q8VDP2 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Q8VDP2 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Q8VDP2 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Q8VDP2 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Q8VDP2 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Q8VDP2 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC17.29■□□□□ 0.36
Q8VDP2 Gm10399-202ENSMUST00000202768 748 ntBASIC17.29■□□□□ 0.36
Q8VDP2 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Q8VDP2 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Q8VDP2 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Q8VDP2 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Q8VDP2 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC17.29■□□□□ 0.36
Q8VDP2 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Q8VDP2 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Q8VDP2 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Q8VDP2 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Q8VDP2 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Q8VDP2 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Q8VDP2 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Q8VDP2 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Q8VDP2 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Q8VDP2 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Q8VDP2 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Q8VDP2 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms