Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC17.01■□□□□ 0.31
Lsm1Q8VC85 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Lsm1Q8VC85 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Lsm1Q8VC85 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Lsm1Q8VC85 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Lsm1Q8VC85 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Lsm1Q8VC85 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Lsm1Q8VC85 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Lsm1Q8VC85 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Lsm1Q8VC85 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Lsm1Q8VC85 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Lsm1Q8VC85 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC17■□□□□ 0.31
Lsm1Q8VC85 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Lsm1Q8VC85 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC17■□□□□ 0.31
Lsm1Q8VC85 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC17■□□□□ 0.31
Lsm1Q8VC85 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Lsm1Q8VC85 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Lsm1Q8VC85 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Lsm1Q8VC85 Gm2399-201ENSMUST00000104944 225 ntBASIC17■□□□□ 0.31
Lsm1Q8VC85 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC17■□□□□ 0.31
Lsm1Q8VC85 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC17■□□□□ 0.31
Lsm1Q8VC85 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC17■□□□□ 0.31
Lsm1Q8VC85 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Lsm1Q8VC85 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Lsm1Q8VC85 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Lsm1Q8VC85 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Lsm1Q8VC85 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Lsm1Q8VC85 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Lsm1Q8VC85 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC17■□□□□ 0.31
Lsm1Q8VC85 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC17■□□□□ 0.31
Lsm1Q8VC85 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC17■□□□□ 0.31
Lsm1Q8VC85 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Lsm1Q8VC85 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Lsm1Q8VC85 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Lsm1Q8VC85 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Lsm1Q8VC85 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Lsm1Q8VC85 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Lsm1Q8VC85 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Lsm1Q8VC85 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC16.99■□□□□ 0.31
Lsm1Q8VC85 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Lsm1Q8VC85 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Lsm1Q8VC85 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Lsm1Q8VC85 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Lsm1Q8VC85 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Lsm1Q8VC85 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC16.99■□□□□ 0.31
Lsm1Q8VC85 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Lsm1Q8VC85 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Lsm1Q8VC85 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC16.99■□□□□ 0.31
Lsm1Q8VC85 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Lsm1Q8VC85 Gm42569-201ENSMUST00000200539 472 ntBASIC16.99■□□□□ 0.31
Lsm1Q8VC85 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Lsm1Q8VC85 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Lsm1Q8VC85 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Lsm1Q8VC85 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
Lsm1Q8VC85 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Lsm1Q8VC85 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Lsm1Q8VC85 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
Lsm1Q8VC85 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC16.99■□□□□ 0.31
Lsm1Q8VC85 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Lsm1Q8VC85 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Lsm1Q8VC85 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Lsm1Q8VC85 Gm37519-201ENSMUST00000191687 2210 ntBASIC16.98■□□□□ 0.31
Lsm1Q8VC85 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Lsm1Q8VC85 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Lsm1Q8VC85 Gm43808-201ENSMUST00000202534 2065 ntBASIC16.98■□□□□ 0.31
Lsm1Q8VC85 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Lsm1Q8VC85 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Lsm1Q8VC85 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Lsm1Q8VC85 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Lsm1Q8VC85 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Lsm1Q8VC85 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Lsm1Q8VC85 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Lsm1Q8VC85 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Lsm1Q8VC85 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Lsm1Q8VC85 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC16.98■□□□□ 0.31
Lsm1Q8VC85 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Lsm1Q8VC85 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Lsm1Q8VC85 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Lsm1Q8VC85 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC16.98■□□□□ 0.31
Lsm1Q8VC85 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Lsm1Q8VC85 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Lsm1Q8VC85 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Lsm1Q8VC85 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Lsm1Q8VC85 Gm43294-201ENSMUST00000202850 2490 ntBASIC16.97■□□□□ 0.31
Lsm1Q8VC85 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Lsm1Q8VC85 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Lsm1Q8VC85 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Lsm1Q8VC85 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC16.97■□□□□ 0.31
Lsm1Q8VC85 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Lsm1Q8VC85 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
Lsm1Q8VC85 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Lsm1Q8VC85 Gm44549-201ENSMUST00000208351 577 ntBASIC16.97■□□□□ 0.31
Lsm1Q8VC85 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC16.97■□□□□ 0.31
Lsm1Q8VC85 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Lsm1Q8VC85 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
Lsm1Q8VC85 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Lsm1Q8VC85 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Lsm1Q8VC85 Zfp783-201ENSMUST00000095946 670 ntBASIC16.97■□□□□ 0.31
Lsm1Q8VC85 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Lsm1Q8VC85 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms