Protein–RNA interactions for Protein: Q8VC56

Rnf8, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 488 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf8Q8VC56 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC17.12■□□□□ 0.33
Rnf8Q8VC56 Gm6365-201ENSMUST00000054711 744 ntBASIC17.12■□□□□ 0.33
Rnf8Q8VC56 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rnf8Q8VC56 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rnf8Q8VC56 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Rnf8Q8VC56 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rnf8Q8VC56 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Rnf8Q8VC56 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC17.12■□□□□ 0.33
Rnf8Q8VC56 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rnf8Q8VC56 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC17.11■□□□□ 0.33
Rnf8Q8VC56 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rnf8Q8VC56 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rnf8Q8VC56 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Rnf8Q8VC56 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rnf8Q8VC56 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC17.11■□□□□ 0.33
Rnf8Q8VC56 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rnf8Q8VC56 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC17.11■□□□□ 0.33
Rnf8Q8VC56 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rnf8Q8VC56 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rnf8Q8VC56 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Rnf8Q8VC56 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rnf8Q8VC56 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Rnf8Q8VC56 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rnf8Q8VC56 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rnf8Q8VC56 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rnf8Q8VC56 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rnf8Q8VC56 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rnf8Q8VC56 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rnf8Q8VC56 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rnf8Q8VC56 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
Rnf8Q8VC56 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rnf8Q8VC56 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rnf8Q8VC56 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Rnf8Q8VC56 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rnf8Q8VC56 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Rnf8Q8VC56 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rnf8Q8VC56 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rnf8Q8VC56 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rnf8Q8VC56 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rnf8Q8VC56 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rnf8Q8VC56 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rnf8Q8VC56 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
Rnf8Q8VC56 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rnf8Q8VC56 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rnf8Q8VC56 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
Rnf8Q8VC56 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rnf8Q8VC56 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
Rnf8Q8VC56 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rnf8Q8VC56 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rnf8Q8VC56 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rnf8Q8VC56 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rnf8Q8VC56 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rnf8Q8VC56 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rnf8Q8VC56 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Rnf8Q8VC56 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC17.09■□□□□ 0.33
Rnf8Q8VC56 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Rnf8Q8VC56 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rnf8Q8VC56 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rnf8Q8VC56 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Rnf8Q8VC56 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Rnf8Q8VC56 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Rnf8Q8VC56 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Rnf8Q8VC56 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Rnf8Q8VC56 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Rnf8Q8VC56 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Rnf8Q8VC56 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rnf8Q8VC56 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Rnf8Q8VC56 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Rnf8Q8VC56 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rnf8Q8VC56 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC17.08■□□□□ 0.32
Rnf8Q8VC56 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rnf8Q8VC56 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rnf8Q8VC56 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.32
Rnf8Q8VC56 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rnf8Q8VC56 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Rnf8Q8VC56 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rnf8Q8VC56 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rnf8Q8VC56 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC17.07■□□□□ 0.32
Rnf8Q8VC56 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rnf8Q8VC56 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Rnf8Q8VC56 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC17.07■□□□□ 0.32
Rnf8Q8VC56 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Rnf8Q8VC56 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Rnf8Q8VC56 Gm6211-202ENSMUST00000167849 925 ntBASIC17.07■□□□□ 0.32
Rnf8Q8VC56 Gm3807-201ENSMUST00000193520 1168 ntBASIC17.07■□□□□ 0.32
Rnf8Q8VC56 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC17.07■□□□□ 0.32
Rnf8Q8VC56 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC17.07■□□□□ 0.32
Rnf8Q8VC56 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rnf8Q8VC56 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rnf8Q8VC56 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC17.07■□□□□ 0.32
Rnf8Q8VC56 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Rnf8Q8VC56 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
Rnf8Q8VC56 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rnf8Q8VC56 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Rnf8Q8VC56 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Rnf8Q8VC56 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rnf8Q8VC56 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rnf8Q8VC56 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC17.06■□□□□ 0.32
Rnf8Q8VC56 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rnf8Q8VC56 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms