Protein–RNA interactions for Protein: Q8R5K2

Usp33, Ubiquitin carboxyl-terminal hydrolase 33, mousemouse

Predictions only

Length 909 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp33Q8R5K2 Gm4974-201ENSMUST00000209974 875 ntBASIC20.4■□□□□ 0.86
Usp33Q8R5K2 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Usp33Q8R5K2 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
Usp33Q8R5K2 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Usp33Q8R5K2 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Usp33Q8R5K2 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
Usp33Q8R5K2 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Usp33Q8R5K2 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Usp33Q8R5K2 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Usp33Q8R5K2 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Usp33Q8R5K2 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Usp33Q8R5K2 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Usp33Q8R5K2 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC20.39■□□□□ 0.85
Usp33Q8R5K2 Gm7284-201ENSMUST00000131667 944 ntBASIC20.39■□□□□ 0.85
Usp33Q8R5K2 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Usp33Q8R5K2 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
Usp33Q8R5K2 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Usp33Q8R5K2 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Usp33Q8R5K2 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
Usp33Q8R5K2 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
Usp33Q8R5K2 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Usp33Q8R5K2 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
Usp33Q8R5K2 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Usp33Q8R5K2 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Usp33Q8R5K2 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC20.38■□□□□ 0.85
Usp33Q8R5K2 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC20.38■□□□□ 0.85
Usp33Q8R5K2 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Usp33Q8R5K2 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Usp33Q8R5K2 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Usp33Q8R5K2 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Usp33Q8R5K2 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Usp33Q8R5K2 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Usp33Q8R5K2 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
Usp33Q8R5K2 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Usp33Q8R5K2 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Usp33Q8R5K2 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Usp33Q8R5K2 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Usp33Q8R5K2 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC20.37■□□□□ 0.85
Usp33Q8R5K2 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Usp33Q8R5K2 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC20.37■□□□□ 0.85
Usp33Q8R5K2 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Usp33Q8R5K2 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
Usp33Q8R5K2 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC20.37■□□□□ 0.85
Usp33Q8R5K2 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Usp33Q8R5K2 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC20.37■□□□□ 0.85
Usp33Q8R5K2 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Usp33Q8R5K2 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
Usp33Q8R5K2 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Usp33Q8R5K2 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Usp33Q8R5K2 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Usp33Q8R5K2 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Usp33Q8R5K2 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC20.36■□□□□ 0.85
Usp33Q8R5K2 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Usp33Q8R5K2 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Usp33Q8R5K2 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Usp33Q8R5K2 Gm25016-201ENSMUST00000158399 131 ntBASIC20.36■□□□□ 0.85
Usp33Q8R5K2 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC20.36■□□□□ 0.85
Usp33Q8R5K2 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Usp33Q8R5K2 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Usp33Q8R5K2 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
Usp33Q8R5K2 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Usp33Q8R5K2 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Usp33Q8R5K2 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Usp33Q8R5K2 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
Usp33Q8R5K2 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Usp33Q8R5K2 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Usp33Q8R5K2 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Usp33Q8R5K2 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
Usp33Q8R5K2 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
Usp33Q8R5K2 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Usp33Q8R5K2 Gm14464-201ENSMUST00000119658 1254 ntBASIC20.35■□□□□ 0.85
Usp33Q8R5K2 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Usp33Q8R5K2 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC20.35■□□□□ 0.85
Usp33Q8R5K2 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC20.35■□□□□ 0.85
Usp33Q8R5K2 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Usp33Q8R5K2 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Usp33Q8R5K2 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC20.35■□□□□ 0.85
Usp33Q8R5K2 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Usp33Q8R5K2 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Usp33Q8R5K2 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC20.35■□□□□ 0.85
Usp33Q8R5K2 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Usp33Q8R5K2 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
Usp33Q8R5K2 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Usp33Q8R5K2 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Usp33Q8R5K2 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Usp33Q8R5K2 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Usp33Q8R5K2 Gm5112-201ENSMUST00000204407 2368 ntBASIC20.34■□□□□ 0.85
Usp33Q8R5K2 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Usp33Q8R5K2 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Usp33Q8R5K2 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Usp33Q8R5K2 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC20.34■□□□□ 0.85
Usp33Q8R5K2 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC20.34■□□□□ 0.85
Usp33Q8R5K2 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Usp33Q8R5K2 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC20.34■□□□□ 0.85
Usp33Q8R5K2 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
Usp33Q8R5K2 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Usp33Q8R5K2 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
Usp33Q8R5K2 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Usp33Q8R5K2 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
Usp33Q8R5K2 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms