Protein–RNA interactions for Protein: Q8R550

Sh3kbp1, SH3 domain-containing kinase-binding protein 1, mousemouse

Known RBP Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3kbp1Q8R550 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sh3kbp1Q8R550 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Sh3kbp1Q8R550 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Sh3kbp1Q8R550 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sh3kbp1Q8R550 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Sh3kbp1Q8R550 Mir1199-201ENSMUST00000117015 119 ntBASIC18.3■□□□□ 0.52
Sh3kbp1Q8R550 Alkbh1-212ENSMUST00000185301 408 ntBASIC18.3■□□□□ 0.52
Sh3kbp1Q8R550 Gm9484-201ENSMUST00000195892 1159 ntBASIC18.3■□□□□ 0.52
Sh3kbp1Q8R550 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Sh3kbp1Q8R550 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC18.3■□□□□ 0.52
Sh3kbp1Q8R550 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
Sh3kbp1Q8R550 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Sh3kbp1Q8R550 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Sh3kbp1Q8R550 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sh3kbp1Q8R550 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Sh3kbp1Q8R550 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Sh3kbp1Q8R550 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sh3kbp1Q8R550 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Sh3kbp1Q8R550 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC18.29■□□□□ 0.52
Sh3kbp1Q8R550 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC18.29■□□□□ 0.52
Sh3kbp1Q8R550 Gm7977-201ENSMUST00000193787 748 ntBASIC18.29■□□□□ 0.52
Sh3kbp1Q8R550 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC18.29■□□□□ 0.52
Sh3kbp1Q8R550 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC18.29■□□□□ 0.52
Sh3kbp1Q8R550 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC18.29■□□□□ 0.52
Sh3kbp1Q8R550 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Sh3kbp1Q8R550 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sh3kbp1Q8R550 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC18.29■□□□□ 0.52
Sh3kbp1Q8R550 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Sh3kbp1Q8R550 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sh3kbp1Q8R550 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sh3kbp1Q8R550 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Sh3kbp1Q8R550 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sh3kbp1Q8R550 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sh3kbp1Q8R550 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sh3kbp1Q8R550 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sh3kbp1Q8R550 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC18.28■□□□□ 0.52
Sh3kbp1Q8R550 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sh3kbp1Q8R550 Gm15565-201ENSMUST00000118890 427 ntBASIC18.28■□□□□ 0.52
Sh3kbp1Q8R550 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
Sh3kbp1Q8R550 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC18.28■□□□□ 0.52
Sh3kbp1Q8R550 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC18.28■□□□□ 0.52
Sh3kbp1Q8R550 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sh3kbp1Q8R550 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Sh3kbp1Q8R550 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sh3kbp1Q8R550 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sh3kbp1Q8R550 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sh3kbp1Q8R550 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sh3kbp1Q8R550 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sh3kbp1Q8R550 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sh3kbp1Q8R550 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC18.28■□□□□ 0.52
Sh3kbp1Q8R550 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Sh3kbp1Q8R550 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Sh3kbp1Q8R550 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Sh3kbp1Q8R550 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Sh3kbp1Q8R550 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Sh3kbp1Q8R550 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Sh3kbp1Q8R550 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Sh3kbp1Q8R550 Gm13836-201ENSMUST00000121159 501 ntBASIC18.27■□□□□ 0.52
Sh3kbp1Q8R550 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Sh3kbp1Q8R550 Gm37055-201ENSMUST00000191866 133 ntBASIC18.27■□□□□ 0.52
Sh3kbp1Q8R550 Mtag2-201ENSMUST00000058665 714 ntBASIC18.27■□□□□ 0.52
Sh3kbp1Q8R550 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Sh3kbp1Q8R550 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
Sh3kbp1Q8R550 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC18.27■□□□□ 0.51
Sh3kbp1Q8R550 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Sh3kbp1Q8R550 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Sh3kbp1Q8R550 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Sh3kbp1Q8R550 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Sh3kbp1Q8R550 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Sh3kbp1Q8R550 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Sh3kbp1Q8R550 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
Sh3kbp1Q8R550 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC18.26■□□□□ 0.51
Sh3kbp1Q8R550 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC18.26■□□□□ 0.51
Sh3kbp1Q8R550 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Sh3kbp1Q8R550 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC18.26■□□□□ 0.51
Sh3kbp1Q8R550 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Sh3kbp1Q8R550 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Sh3kbp1Q8R550 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Sh3kbp1Q8R550 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Sh3kbp1Q8R550 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Sh3kbp1Q8R550 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Sh3kbp1Q8R550 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Sh3kbp1Q8R550 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Sh3kbp1Q8R550 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Sh3kbp1Q8R550 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Sh3kbp1Q8R550 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Sh3kbp1Q8R550 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Sh3kbp1Q8R550 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Sh3kbp1Q8R550 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Sh3kbp1Q8R550 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Sh3kbp1Q8R550 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC18.25■□□□□ 0.51
Sh3kbp1Q8R550 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC18.25■□□□□ 0.51
Sh3kbp1Q8R550 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Sh3kbp1Q8R550 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Sh3kbp1Q8R550 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Sh3kbp1Q8R550 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Sh3kbp1Q8R550 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Sh3kbp1Q8R550 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Sh3kbp1Q8R550 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Sh3kbp1Q8R550 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms