Protein–RNA interactions for Protein: Q8R4U6

Top1mt, DNA topoisomerase I, mitochondrial, mousemouse

Predictions only

Length 593 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Top1mtQ8R4U6 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Top1mtQ8R4U6 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Top1mtQ8R4U6 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Top1mtQ8R4U6 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Top1mtQ8R4U6 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Top1mtQ8R4U6 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Top1mtQ8R4U6 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Top1mtQ8R4U6 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Top1mtQ8R4U6 Gm21596-201ENSMUST00000178049 1316 ntBASIC21.25■□□□□ 0.99
Top1mtQ8R4U6 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC21.24■□□□□ 0.99
Top1mtQ8R4U6 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Top1mtQ8R4U6 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Top1mtQ8R4U6 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC21.24■□□□□ 0.99
Top1mtQ8R4U6 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Top1mtQ8R4U6 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Top1mtQ8R4U6 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Top1mtQ8R4U6 Gm27275-201ENSMUST00000184318 272 ntBASIC21.24■□□□□ 0.99
Top1mtQ8R4U6 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Top1mtQ8R4U6 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
Top1mtQ8R4U6 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Top1mtQ8R4U6 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Top1mtQ8R4U6 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Top1mtQ8R4U6 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Top1mtQ8R4U6 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC21.23■□□□□ 0.99
Top1mtQ8R4U6 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Top1mtQ8R4U6 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC21.23■□□□□ 0.99
Top1mtQ8R4U6 AC163280.1-201ENSMUST00000228194 1100 ntBASIC21.23■□□□□ 0.99
Top1mtQ8R4U6 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Top1mtQ8R4U6 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Top1mtQ8R4U6 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
Top1mtQ8R4U6 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Top1mtQ8R4U6 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Top1mtQ8R4U6 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Top1mtQ8R4U6 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Top1mtQ8R4U6 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Top1mtQ8R4U6 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Top1mtQ8R4U6 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Top1mtQ8R4U6 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Top1mtQ8R4U6 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Top1mtQ8R4U6 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Top1mtQ8R4U6 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Top1mtQ8R4U6 Gm29257-201ENSMUST00000186115 639 ntBASIC21.22■□□□□ 0.99
Top1mtQ8R4U6 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC21.22■□□□□ 0.99
Top1mtQ8R4U6 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Top1mtQ8R4U6 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Top1mtQ8R4U6 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Top1mtQ8R4U6 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Top1mtQ8R4U6 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Top1mtQ8R4U6 Gm37194-201ENSMUST00000193092 3031 ntBASIC21.22■□□□□ 0.99
Top1mtQ8R4U6 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC21.22■□□□□ 0.99
Top1mtQ8R4U6 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Top1mtQ8R4U6 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Top1mtQ8R4U6 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Top1mtQ8R4U6 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Top1mtQ8R4U6 Gm37820-201ENSMUST00000194021 2147 ntBASIC21.22■□□□□ 0.99
Top1mtQ8R4U6 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Top1mtQ8R4U6 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Top1mtQ8R4U6 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC21.21■□□□□ 0.99
Top1mtQ8R4U6 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC21.21■□□□□ 0.99
Top1mtQ8R4U6 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Top1mtQ8R4U6 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC21.21■□□□□ 0.99
Top1mtQ8R4U6 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Top1mtQ8R4U6 Gm29791-202ENSMUST00000207888 369 ntBASIC21.21■□□□□ 0.99
Top1mtQ8R4U6 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Top1mtQ8R4U6 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Top1mtQ8R4U6 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
Top1mtQ8R4U6 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Top1mtQ8R4U6 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Top1mtQ8R4U6 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
Top1mtQ8R4U6 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
Top1mtQ8R4U6 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Top1mtQ8R4U6 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Top1mtQ8R4U6 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Top1mtQ8R4U6 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Top1mtQ8R4U6 Alkbh1-212ENSMUST00000185301 408 ntBASIC21.2■□□□□ 0.98
Top1mtQ8R4U6 Gm10138-203ENSMUST00000206952 366 ntBASIC21.2■□□□□ 0.98
Top1mtQ8R4U6 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Top1mtQ8R4U6 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC21.2■□□□□ 0.98
Top1mtQ8R4U6 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Top1mtQ8R4U6 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Top1mtQ8R4U6 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Top1mtQ8R4U6 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Top1mtQ8R4U6 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC21.19■□□□□ 0.98
Top1mtQ8R4U6 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Top1mtQ8R4U6 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Top1mtQ8R4U6 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
Top1mtQ8R4U6 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
Top1mtQ8R4U6 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Top1mtQ8R4U6 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Top1mtQ8R4U6 Gm12527-201ENSMUST00000117967 564 ntBASIC21.19■□□□□ 0.98
Top1mtQ8R4U6 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
Top1mtQ8R4U6 Gm8969-201ENSMUST00000199694 526 ntBASIC21.19■□□□□ 0.98
Top1mtQ8R4U6 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Top1mtQ8R4U6 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Top1mtQ8R4U6 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Top1mtQ8R4U6 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC21.19■□□□□ 0.98
Top1mtQ8R4U6 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Top1mtQ8R4U6 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Top1mtQ8R4U6 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Top1mtQ8R4U6 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms