Protein–RNA interactions for Protein: Q8R422

Cd109, CD109 antigen, mousemouse

Predictions only

Length 1,442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd109Q8R422 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC25.3■■□□□ 1.64
Cd109Q8R422 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
Cd109Q8R422 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC25.3■■□□□ 1.64
Cd109Q8R422 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Cd109Q8R422 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Cd109Q8R422 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Cd109Q8R422 Golph3-205ENSMUST00000228671 2842 ntBASIC25.3■■□□□ 1.64
Cd109Q8R422 Gm6627-201ENSMUST00000218299 2386 ntBASIC25.29■■□□□ 1.64
Cd109Q8R422 Il3ra-202ENSMUST00000223589 738 ntBASIC25.29■■□□□ 1.64
Cd109Q8R422 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Cd109Q8R422 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Cd109Q8R422 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Cd109Q8R422 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
Cd109Q8R422 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC25.29■■□□□ 1.64
Cd109Q8R422 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
Cd109Q8R422 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC25.29■■□□□ 1.64
Cd109Q8R422 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC25.29■■□□□ 1.64
Cd109Q8R422 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC25.29■■□□□ 1.64
Cd109Q8R422 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Cd109Q8R422 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC25.29■■□□□ 1.64
Cd109Q8R422 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Cd109Q8R422 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC25.29■■□□□ 1.64
Cd109Q8R422 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Cd109Q8R422 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
Cd109Q8R422 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Cd109Q8R422 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC25.28■■□□□ 1.64
Cd109Q8R422 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
Cd109Q8R422 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC25.28■■□□□ 1.64
Cd109Q8R422 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
Cd109Q8R422 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC25.27■■□□□ 1.64
Cd109Q8R422 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
Cd109Q8R422 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC25.27■■□□□ 1.64
Cd109Q8R422 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
Cd109Q8R422 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC25.27■■□□□ 1.64
Cd109Q8R422 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC25.27■■□□□ 1.64
Cd109Q8R422 Gm37025-201ENSMUST00000195159 829 ntBASIC25.27■■□□□ 1.64
Cd109Q8R422 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
Cd109Q8R422 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC25.27■■□□□ 1.64
Cd109Q8R422 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
Cd109Q8R422 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
Cd109Q8R422 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
Cd109Q8R422 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC25.26■■□□□ 1.63
Cd109Q8R422 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC25.26■■□□□ 1.63
Cd109Q8R422 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Cd109Q8R422 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC25.26■■□□□ 1.63
Cd109Q8R422 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Cd109Q8R422 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC25.26■■□□□ 1.63
Cd109Q8R422 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
Cd109Q8R422 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC25.26■■□□□ 1.63
Cd109Q8R422 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Cd109Q8R422 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Cd109Q8R422 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC25.26■■□□□ 1.63
Cd109Q8R422 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Cd109Q8R422 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC25.26■■□□□ 1.63
Cd109Q8R422 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Cd109Q8R422 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
Cd109Q8R422 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC25.25■■□□□ 1.63
Cd109Q8R422 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
Cd109Q8R422 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
Cd109Q8R422 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
Cd109Q8R422 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC25.25■■□□□ 1.63
Cd109Q8R422 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
Cd109Q8R422 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
Cd109Q8R422 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC25.25■■□□□ 1.63
Cd109Q8R422 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
Cd109Q8R422 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
Cd109Q8R422 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
Cd109Q8R422 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
Cd109Q8R422 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
Cd109Q8R422 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC25.24■■□□□ 1.63
Cd109Q8R422 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC25.24■■□□□ 1.63
Cd109Q8R422 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC25.24■■□□□ 1.63
Cd109Q8R422 Gm13474-201ENSMUST00000122466 815 ntBASIC25.24■■□□□ 1.63
Cd109Q8R422 AC154471.1-201ENSMUST00000224418 436 ntBASIC25.24■■□□□ 1.63
Cd109Q8R422 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
Cd109Q8R422 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC25.23■■□□□ 1.63
Cd109Q8R422 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC25.23■■□□□ 1.63
Cd109Q8R422 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC25.23■■□□□ 1.63
Cd109Q8R422 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
Cd109Q8R422 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC25.23■■□□□ 1.63
Cd109Q8R422 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
Cd109Q8R422 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
Cd109Q8R422 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
Cd109Q8R422 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC25.22■■□□□ 1.63
Cd109Q8R422 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC25.22■■□□□ 1.63
Cd109Q8R422 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
Cd109Q8R422 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
Cd109Q8R422 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC25.22■■□□□ 1.63
Cd109Q8R422 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC25.22■■□□□ 1.63
Cd109Q8R422 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC25.22■■□□□ 1.63
Cd109Q8R422 Gm35558-201ENSMUST00000222675 2219 ntBASIC25.22■■□□□ 1.63
Cd109Q8R422 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC25.22■■□□□ 1.63
Cd109Q8R422 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
Cd109Q8R422 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
Cd109Q8R422 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
Cd109Q8R422 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
Cd109Q8R422 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
Cd109Q8R422 Mir1668-201ENSMUST00000184114 107 ntBASIC25.21■■□□□ 1.63
Cd109Q8R422 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC25.21■■□□□ 1.63
Cd109Q8R422 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
Retrieved 100 of 76,532 protein–RNA pairs in 10.5 ms