Protein–RNA interactions for Protein: Q8R3P9

Slf1, SMC5-SMC6 complex localization factor protein 1, mousemouse

Predictions only

Length 1,054 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slf1Q8R3P9 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Slf1Q8R3P9 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
Slf1Q8R3P9 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Slf1Q8R3P9 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC17.95■□□□□ 0.46
Slf1Q8R3P9 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Slf1Q8R3P9 CT030146.1-201ENSMUST00000220919 217 ntBASIC17.95■□□□□ 0.46
Slf1Q8R3P9 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Slf1Q8R3P9 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Slf1Q8R3P9 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Slf1Q8R3P9 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Slf1Q8R3P9 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Slf1Q8R3P9 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Slf1Q8R3P9 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC17.95■□□□□ 0.46
Slf1Q8R3P9 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Slf1Q8R3P9 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC17.95■□□□□ 0.46
Slf1Q8R3P9 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Slf1Q8R3P9 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC17.94■□□□□ 0.46
Slf1Q8R3P9 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Slf1Q8R3P9 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Slf1Q8R3P9 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Slf1Q8R3P9 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Slf1Q8R3P9 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Slf1Q8R3P9 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC17.94■□□□□ 0.46
Slf1Q8R3P9 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Slf1Q8R3P9 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Slf1Q8R3P9 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Slf1Q8R3P9 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC17.93■□□□□ 0.46
Slf1Q8R3P9 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Slf1Q8R3P9 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC17.93■□□□□ 0.46
Slf1Q8R3P9 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Slf1Q8R3P9 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Slf1Q8R3P9 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC17.93■□□□□ 0.46
Slf1Q8R3P9 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC17.93■□□□□ 0.46
Slf1Q8R3P9 Gm43060-201ENSMUST00000200621 289 ntBASIC17.93■□□□□ 0.46
Slf1Q8R3P9 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Slf1Q8R3P9 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Slf1Q8R3P9 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Slf1Q8R3P9 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Slf1Q8R3P9 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Slf1Q8R3P9 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Slf1Q8R3P9 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Slf1Q8R3P9 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Slf1Q8R3P9 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Slf1Q8R3P9 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Slf1Q8R3P9 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Slf1Q8R3P9 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Slf1Q8R3P9 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Slf1Q8R3P9 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC17.92■□□□□ 0.46
Slf1Q8R3P9 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Slf1Q8R3P9 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Slf1Q8R3P9 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Slf1Q8R3P9 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Slf1Q8R3P9 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Slf1Q8R3P9 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Slf1Q8R3P9 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Slf1Q8R3P9 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Slf1Q8R3P9 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Slf1Q8R3P9 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Slf1Q8R3P9 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Slf1Q8R3P9 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Slf1Q8R3P9 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Slf1Q8R3P9 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC17.91■□□□□ 0.46
Slf1Q8R3P9 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Slf1Q8R3P9 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Slf1Q8R3P9 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
Slf1Q8R3P9 Gm21168-201ENSMUST00000199646 1096 ntBASIC17.91■□□□□ 0.46
Slf1Q8R3P9 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC17.91■□□□□ 0.46
Slf1Q8R3P9 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC17.91■□□□□ 0.46
Slf1Q8R3P9 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC17.91■□□□□ 0.46
Slf1Q8R3P9 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Slf1Q8R3P9 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Slf1Q8R3P9 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Slf1Q8R3P9 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Slf1Q8R3P9 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Slf1Q8R3P9 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Slf1Q8R3P9 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Slf1Q8R3P9 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Slf1Q8R3P9 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Slf1Q8R3P9 Gm7860-201ENSMUST00000121190 879 ntBASIC17.9■□□□□ 0.46
Slf1Q8R3P9 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Slf1Q8R3P9 Gm2011-201ENSMUST00000203124 1263 ntBASIC17.9■□□□□ 0.46
Slf1Q8R3P9 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Slf1Q8R3P9 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Slf1Q8R3P9 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Slf1Q8R3P9 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Slf1Q8R3P9 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Slf1Q8R3P9 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Slf1Q8R3P9 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Slf1Q8R3P9 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Slf1Q8R3P9 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Slf1Q8R3P9 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
Slf1Q8R3P9 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Slf1Q8R3P9 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Slf1Q8R3P9 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Slf1Q8R3P9 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC17.89■□□□□ 0.45
Slf1Q8R3P9 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC17.89■□□□□ 0.45
Slf1Q8R3P9 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Slf1Q8R3P9 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Slf1Q8R3P9 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Slf1Q8R3P9 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms