Protein–RNA interactions for Protein: Q8R317

Ubqln1, Ubiquilin-1, mousemouse

Predictions only

Length 582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubqln1Q8R317 Gm11927-201ENSMUST00000118472 759 ntBASIC16.83■□□□□ 0.28
Ubqln1Q8R317 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC16.83■□□□□ 0.28
Ubqln1Q8R317 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC16.83■□□□□ 0.28
Ubqln1Q8R317 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC16.83■□□□□ 0.28
Ubqln1Q8R317 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ubqln1Q8R317 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Ubqln1Q8R317 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC16.83■□□□□ 0.28
Ubqln1Q8R317 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ubqln1Q8R317 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC16.83■□□□□ 0.28
Ubqln1Q8R317 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ubqln1Q8R317 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Ubqln1Q8R317 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ubqln1Q8R317 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ubqln1Q8R317 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ubqln1Q8R317 Dio3-201ENSMUST00000097228 1449 ntBASIC16.83■□□□□ 0.28
Ubqln1Q8R317 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC16.83■□□□□ 0.28
Ubqln1Q8R317 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Ubqln1Q8R317 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Ubqln1Q8R317 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ubqln1Q8R317 Gm44832-201ENSMUST00000208849 2303 ntBASIC16.82■□□□□ 0.28
Ubqln1Q8R317 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ubqln1Q8R317 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ubqln1Q8R317 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Ubqln1Q8R317 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Ubqln1Q8R317 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ubqln1Q8R317 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Ubqln1Q8R317 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ubqln1Q8R317 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
Ubqln1Q8R317 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC16.82■□□□□ 0.28
Ubqln1Q8R317 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ubqln1Q8R317 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC16.82■□□□□ 0.28
Ubqln1Q8R317 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ubqln1Q8R317 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ubqln1Q8R317 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ubqln1Q8R317 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ubqln1Q8R317 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ubqln1Q8R317 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ubqln1Q8R317 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Ubqln1Q8R317 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ubqln1Q8R317 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Ubqln1Q8R317 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ubqln1Q8R317 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ubqln1Q8R317 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ubqln1Q8R317 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ubqln1Q8R317 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC16.81■□□□□ 0.28
Ubqln1Q8R317 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Ubqln1Q8R317 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ubqln1Q8R317 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ubqln1Q8R317 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ubqln1Q8R317 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ubqln1Q8R317 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ubqln1Q8R317 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ubqln1Q8R317 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Ubqln1Q8R317 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Ubqln1Q8R317 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Ubqln1Q8R317 Gm12896-201ENSMUST00000118430 226 ntBASIC16.8■□□□□ 0.28
Ubqln1Q8R317 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ubqln1Q8R317 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ubqln1Q8R317 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Ubqln1Q8R317 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC16.8■□□□□ 0.28
Ubqln1Q8R317 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC16.8■□□□□ 0.28
Ubqln1Q8R317 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ubqln1Q8R317 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ubqln1Q8R317 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC16.8■□□□□ 0.28
Ubqln1Q8R317 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC16.79■□□□□ 0.28
Ubqln1Q8R317 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ubqln1Q8R317 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ubqln1Q8R317 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ubqln1Q8R317 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ubqln1Q8R317 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ubqln1Q8R317 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ubqln1Q8R317 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Ubqln1Q8R317 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ubqln1Q8R317 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Ubqln1Q8R317 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC16.79■□□□□ 0.28
Ubqln1Q8R317 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Ubqln1Q8R317 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ubqln1Q8R317 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Ubqln1Q8R317 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ubqln1Q8R317 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ubqln1Q8R317 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ubqln1Q8R317 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Ubqln1Q8R317 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ubqln1Q8R317 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ubqln1Q8R317 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ubqln1Q8R317 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ubqln1Q8R317 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ubqln1Q8R317 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC16.78■□□□□ 0.28
Ubqln1Q8R317 Gm45141-201ENSMUST00000206502 1888 ntBASIC16.78■□□□□ 0.28
Ubqln1Q8R317 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ubqln1Q8R317 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ubqln1Q8R317 Gm37374-201ENSMUST00000194954 1829 ntBASIC16.78■□□□□ 0.28
Ubqln1Q8R317 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ubqln1Q8R317 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC16.78■□□□□ 0.28
Ubqln1Q8R317 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Ubqln1Q8R317 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC16.78■□□□□ 0.28
Ubqln1Q8R317 Gm20049-201ENSMUST00000219950 730 ntBASIC16.78■□□□□ 0.28
Ubqln1Q8R317 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ubqln1Q8R317 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ubqln1Q8R317 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms