Protein–RNA interactions for Protein: Q8R1T1

Chmp7, Charged multivesicular body protein 7, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp7Q8R1T1 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Chmp7Q8R1T1 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC22.74■■□□□ 1.23
Chmp7Q8R1T1 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
Chmp7Q8R1T1 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
Chmp7Q8R1T1 Gm24841-201ENSMUST00000158676 357 ntBASIC22.74■■□□□ 1.23
Chmp7Q8R1T1 Gm4217-201ENSMUST00000182243 1002 ntBASIC22.74■■□□□ 1.23
Chmp7Q8R1T1 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC22.74■■□□□ 1.23
Chmp7Q8R1T1 Gm10459-201ENSMUST00000202708 1155 ntBASIC22.74■■□□□ 1.23
Chmp7Q8R1T1 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC22.74■■□□□ 1.23
Chmp7Q8R1T1 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC22.74■■□□□ 1.23
Chmp7Q8R1T1 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Chmp7Q8R1T1 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC22.74■■□□□ 1.23
Chmp7Q8R1T1 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Chmp7Q8R1T1 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Chmp7Q8R1T1 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC22.74■■□□□ 1.23
Chmp7Q8R1T1 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Chmp7Q8R1T1 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Chmp7Q8R1T1 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Chmp7Q8R1T1 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC22.73■■□□□ 1.23
Chmp7Q8R1T1 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Chmp7Q8R1T1 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Chmp7Q8R1T1 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Chmp7Q8R1T1 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Chmp7Q8R1T1 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Chmp7Q8R1T1 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
Chmp7Q8R1T1 Gm22697-201ENSMUST00000175194 63 ntBASIC22.73■■□□□ 1.23
Chmp7Q8R1T1 Gm29791-202ENSMUST00000207888 369 ntBASIC22.73■■□□□ 1.23
Chmp7Q8R1T1 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Chmp7Q8R1T1 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Chmp7Q8R1T1 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC22.73■■□□□ 1.23
Chmp7Q8R1T1 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC22.73■■□□□ 1.23
Chmp7Q8R1T1 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC22.73■■□□□ 1.23
Chmp7Q8R1T1 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC22.73■■□□□ 1.23
Chmp7Q8R1T1 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC22.73■■□□□ 1.23
Chmp7Q8R1T1 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC22.72■■□□□ 1.23
Chmp7Q8R1T1 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
Chmp7Q8R1T1 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Chmp7Q8R1T1 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Chmp7Q8R1T1 Gm7638-201ENSMUST00000121348 967 ntBASIC22.72■■□□□ 1.23
Chmp7Q8R1T1 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
Chmp7Q8R1T1 Gm6345-202ENSMUST00000180900 204 ntBASIC22.72■■□□□ 1.23
Chmp7Q8R1T1 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Chmp7Q8R1T1 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Chmp7Q8R1T1 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Chmp7Q8R1T1 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Chmp7Q8R1T1 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
Chmp7Q8R1T1 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC22.71■■□□□ 1.23
Chmp7Q8R1T1 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Chmp7Q8R1T1 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC22.71■■□□□ 1.23
Chmp7Q8R1T1 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC22.71■■□□□ 1.23
Chmp7Q8R1T1 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC22.71■■□□□ 1.23
Chmp7Q8R1T1 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC22.71■■□□□ 1.23
Chmp7Q8R1T1 Gm16061-201ENSMUST00000122167 857 ntBASIC22.71■■□□□ 1.23
Chmp7Q8R1T1 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
Chmp7Q8R1T1 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Chmp7Q8R1T1 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC22.71■■□□□ 1.23
Chmp7Q8R1T1 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC22.71■■□□□ 1.23
Chmp7Q8R1T1 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC22.71■■□□□ 1.23
Chmp7Q8R1T1 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
Chmp7Q8R1T1 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC22.7■■□□□ 1.23
Chmp7Q8R1T1 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC22.7■■□□□ 1.23
Chmp7Q8R1T1 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.23
Chmp7Q8R1T1 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC22.7■■□□□ 1.22
Chmp7Q8R1T1 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
Chmp7Q8R1T1 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
Chmp7Q8R1T1 Gm7791-201ENSMUST00000219066 539 ntBASIC22.7■■□□□ 1.22
Chmp7Q8R1T1 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC22.7■■□□□ 1.22
Chmp7Q8R1T1 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC22.7■■□□□ 1.22
Chmp7Q8R1T1 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC22.7■■□□□ 1.22
Chmp7Q8R1T1 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
Chmp7Q8R1T1 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC22.7■■□□□ 1.22
Chmp7Q8R1T1 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Chmp7Q8R1T1 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC22.69■■□□□ 1.22
Chmp7Q8R1T1 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Chmp7Q8R1T1 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC22.69■■□□□ 1.22
Chmp7Q8R1T1 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC22.69■■□□□ 1.22
Chmp7Q8R1T1 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Chmp7Q8R1T1 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Chmp7Q8R1T1 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Chmp7Q8R1T1 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC22.69■■□□□ 1.22
Chmp7Q8R1T1 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Chmp7Q8R1T1 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
Chmp7Q8R1T1 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Chmp7Q8R1T1 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
Chmp7Q8R1T1 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
Chmp7Q8R1T1 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Chmp7Q8R1T1 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
Chmp7Q8R1T1 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC22.68■■□□□ 1.22
Chmp7Q8R1T1 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC22.68■■□□□ 1.22
Chmp7Q8R1T1 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
Chmp7Q8R1T1 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
Chmp7Q8R1T1 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Chmp7Q8R1T1 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
Chmp7Q8R1T1 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC22.68■■□□□ 1.22
Chmp7Q8R1T1 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC22.68■■□□□ 1.22
Chmp7Q8R1T1 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC22.68■■□□□ 1.22
Chmp7Q8R1T1 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Chmp7Q8R1T1 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Chmp7Q8R1T1 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Chmp7Q8R1T1 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms