Protein–RNA interactions for Protein: Q8R1N4

Nudcd3, NudC domain-containing protein 3, mousemouse

Predictions only

Length 363 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nudcd3Q8R1N4 Gm43017-201ENSMUST00000198296 752 ntBASIC17.8■□□□□ 0.44
Nudcd3Q8R1N4 Gm43060-201ENSMUST00000200621 289 ntBASIC17.8■□□□□ 0.44
Nudcd3Q8R1N4 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Nudcd3Q8R1N4 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Nudcd3Q8R1N4 Gm43338-201ENSMUST00000198617 2223 ntBASIC17.8■□□□□ 0.44
Nudcd3Q8R1N4 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Nudcd3Q8R1N4 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Nudcd3Q8R1N4 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Nudcd3Q8R1N4 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Nudcd3Q8R1N4 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC17.8■□□□□ 0.44
Nudcd3Q8R1N4 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Nudcd3Q8R1N4 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Nudcd3Q8R1N4 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Nudcd3Q8R1N4 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Nudcd3Q8R1N4 Gm13146-201ENSMUST00000118508 780 ntBASIC17.79■□□□□ 0.44
Nudcd3Q8R1N4 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Nudcd3Q8R1N4 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Nudcd3Q8R1N4 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Nudcd3Q8R1N4 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC17.79■□□□□ 0.44
Nudcd3Q8R1N4 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Nudcd3Q8R1N4 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Nudcd3Q8R1N4 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Nudcd3Q8R1N4 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Nudcd3Q8R1N4 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC17.79■□□□□ 0.44
Nudcd3Q8R1N4 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Nudcd3Q8R1N4 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Nudcd3Q8R1N4 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Nudcd3Q8R1N4 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Nudcd3Q8R1N4 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Nudcd3Q8R1N4 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC17.78■□□□□ 0.44
Nudcd3Q8R1N4 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Nudcd3Q8R1N4 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Nudcd3Q8R1N4 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Nudcd3Q8R1N4 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Nudcd3Q8R1N4 Gm9988-201ENSMUST00000069786 435 ntBASIC17.78■□□□□ 0.44
Nudcd3Q8R1N4 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Nudcd3Q8R1N4 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Nudcd3Q8R1N4 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Nudcd3Q8R1N4 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Nudcd3Q8R1N4 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Nudcd3Q8R1N4 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Nudcd3Q8R1N4 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Nudcd3Q8R1N4 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Nudcd3Q8R1N4 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC17.77■□□□□ 0.44
Nudcd3Q8R1N4 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC17.77■□□□□ 0.44
Nudcd3Q8R1N4 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC17.77■□□□□ 0.44
Nudcd3Q8R1N4 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC17.77■□□□□ 0.44
Nudcd3Q8R1N4 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC17.77■□□□□ 0.44
Nudcd3Q8R1N4 Gm13534-201ENSMUST00000121169 513 ntBASIC17.77■□□□□ 0.44
Nudcd3Q8R1N4 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
Nudcd3Q8R1N4 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Nudcd3Q8R1N4 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Nudcd3Q8R1N4 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Nudcd3Q8R1N4 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Nudcd3Q8R1N4 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.43
Nudcd3Q8R1N4 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Nudcd3Q8R1N4 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC17.77■□□□□ 0.43
Nudcd3Q8R1N4 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Nudcd3Q8R1N4 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Nudcd3Q8R1N4 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Nudcd3Q8R1N4 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
Nudcd3Q8R1N4 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Nudcd3Q8R1N4 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Nudcd3Q8R1N4 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Nudcd3Q8R1N4 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Nudcd3Q8R1N4 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Nudcd3Q8R1N4 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Nudcd3Q8R1N4 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Nudcd3Q8R1N4 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Nudcd3Q8R1N4 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Nudcd3Q8R1N4 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Nudcd3Q8R1N4 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Nudcd3Q8R1N4 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Nudcd3Q8R1N4 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Nudcd3Q8R1N4 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nudcd3Q8R1N4 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC17.75■□□□□ 0.43
Nudcd3Q8R1N4 Gm43808-201ENSMUST00000202534 2065 ntBASIC17.75■□□□□ 0.43
Nudcd3Q8R1N4 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nudcd3Q8R1N4 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nudcd3Q8R1N4 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Nudcd3Q8R1N4 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Nudcd3Q8R1N4 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Nudcd3Q8R1N4 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC17.75■□□□□ 0.43
Nudcd3Q8R1N4 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Nudcd3Q8R1N4 Gm45417-201ENSMUST00000209533 758 ntBASIC17.75■□□□□ 0.43
Nudcd3Q8R1N4 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Nudcd3Q8R1N4 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nudcd3Q8R1N4 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nudcd3Q8R1N4 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Nudcd3Q8R1N4 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC17.75■□□□□ 0.43
Nudcd3Q8R1N4 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Nudcd3Q8R1N4 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Nudcd3Q8R1N4 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nudcd3Q8R1N4 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC17.74■□□□□ 0.43
Nudcd3Q8R1N4 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nudcd3Q8R1N4 Gm7292-201ENSMUST00000194706 2527 ntBASIC17.74■□□□□ 0.43
Nudcd3Q8R1N4 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Nudcd3Q8R1N4 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Nudcd3Q8R1N4 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC17.74■□□□□ 0.43
Nudcd3Q8R1N4 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms