Protein–RNA interactions for Protein: Q8K4Z5

Sf3a1, Splicing factor 3A subunit 1, mousemouse

Known RBP Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a1Q8K4Z5 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Sf3a1Q8K4Z5 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC21.72■■□□□ 1.07
Sf3a1Q8K4Z5 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC21.72■■□□□ 1.07
Sf3a1Q8K4Z5 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Sf3a1Q8K4Z5 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Sf3a1Q8K4Z5 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
Sf3a1Q8K4Z5 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC21.72■■□□□ 1.07
Sf3a1Q8K4Z5 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC21.72■■□□□ 1.07
Sf3a1Q8K4Z5 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Sf3a1Q8K4Z5 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Sf3a1Q8K4Z5 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Sf3a1Q8K4Z5 Gm10654-201ENSMUST00000098653 1633 ntBASIC21.71■■□□□ 1.07
Sf3a1Q8K4Z5 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC21.71■■□□□ 1.07
Sf3a1Q8K4Z5 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC21.71■■□□□ 1.07
Sf3a1Q8K4Z5 Gm22240-201ENSMUST00000175225 82 ntBASIC21.71■■□□□ 1.07
Sf3a1Q8K4Z5 Gm10698-201ENSMUST00000182663 604 ntBASIC21.71■■□□□ 1.07
Sf3a1Q8K4Z5 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Sf3a1Q8K4Z5 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Sf3a1Q8K4Z5 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Sf3a1Q8K4Z5 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC21.71■■□□□ 1.07
Sf3a1Q8K4Z5 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Sf3a1Q8K4Z5 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
Sf3a1Q8K4Z5 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
Sf3a1Q8K4Z5 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
Sf3a1Q8K4Z5 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
Sf3a1Q8K4Z5 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.07
Sf3a1Q8K4Z5 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.07
Sf3a1Q8K4Z5 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Sf3a1Q8K4Z5 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
Sf3a1Q8K4Z5 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Sf3a1Q8K4Z5 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Sf3a1Q8K4Z5 Gm29241-201ENSMUST00000189260 1096 ntBASIC21.7■■□□□ 1.06
Sf3a1Q8K4Z5 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Sf3a1Q8K4Z5 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Sf3a1Q8K4Z5 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC21.7■■□□□ 1.06
Sf3a1Q8K4Z5 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Sf3a1Q8K4Z5 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
Sf3a1Q8K4Z5 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Sf3a1Q8K4Z5 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Sf3a1Q8K4Z5 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Sf3a1Q8K4Z5 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
Sf3a1Q8K4Z5 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Sf3a1Q8K4Z5 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Sf3a1Q8K4Z5 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Sf3a1Q8K4Z5 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC21.69■■□□□ 1.06
Sf3a1Q8K4Z5 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC21.69■■□□□ 1.06
Sf3a1Q8K4Z5 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Sf3a1Q8K4Z5 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Sf3a1Q8K4Z5 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Sf3a1Q8K4Z5 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Sf3a1Q8K4Z5 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Sf3a1Q8K4Z5 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC21.69■■□□□ 1.06
Sf3a1Q8K4Z5 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Sf3a1Q8K4Z5 Gm45141-201ENSMUST00000206502 1888 ntBASIC21.69■■□□□ 1.06
Sf3a1Q8K4Z5 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Sf3a1Q8K4Z5 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Sf3a1Q8K4Z5 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC21.68■■□□□ 1.06
Sf3a1Q8K4Z5 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Sf3a1Q8K4Z5 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Sf3a1Q8K4Z5 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
Sf3a1Q8K4Z5 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC21.68■■□□□ 1.06
Sf3a1Q8K4Z5 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Sf3a1Q8K4Z5 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Sf3a1Q8K4Z5 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Sf3a1Q8K4Z5 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Sf3a1Q8K4Z5 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
Sf3a1Q8K4Z5 Gm15378-201ENSMUST00000121894 207 ntBASIC21.67■■□□□ 1.06
Sf3a1Q8K4Z5 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC21.67■■□□□ 1.06
Sf3a1Q8K4Z5 Gm18025-201ENSMUST00000221733 862 ntBASIC21.67■■□□□ 1.06
Sf3a1Q8K4Z5 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Sf3a1Q8K4Z5 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Sf3a1Q8K4Z5 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Sf3a1Q8K4Z5 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
Sf3a1Q8K4Z5 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
Sf3a1Q8K4Z5 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Sf3a1Q8K4Z5 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
Sf3a1Q8K4Z5 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Sf3a1Q8K4Z5 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Sf3a1Q8K4Z5 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Sf3a1Q8K4Z5 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Sf3a1Q8K4Z5 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
Sf3a1Q8K4Z5 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
Sf3a1Q8K4Z5 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Sf3a1Q8K4Z5 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Sf3a1Q8K4Z5 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Sf3a1Q8K4Z5 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC21.65■■□□□ 1.06
Sf3a1Q8K4Z5 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Sf3a1Q8K4Z5 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC21.65■■□□□ 1.06
Sf3a1Q8K4Z5 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Sf3a1Q8K4Z5 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Sf3a1Q8K4Z5 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Sf3a1Q8K4Z5 Gm42545-201ENSMUST00000202755 922 ntBASIC21.65■■□□□ 1.06
Sf3a1Q8K4Z5 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC21.65■■□□□ 1.06
Sf3a1Q8K4Z5 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Sf3a1Q8K4Z5 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
Sf3a1Q8K4Z5 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Sf3a1Q8K4Z5 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Sf3a1Q8K4Z5 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
Sf3a1Q8K4Z5 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
Sf3a1Q8K4Z5 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Retrieved 100 of 76,532 protein–RNA pairs in 56 ms