Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Clrn1Q8K445 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Clrn1Q8K445 Dmtn-207ENSMUST00000228001 2437 ntBASIC16.78■□□□□ 0.28
Clrn1Q8K445 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Clrn1Q8K445 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Clrn1Q8K445 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC16.78■□□□□ 0.28
Clrn1Q8K445 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Clrn1Q8K445 Gm37374-201ENSMUST00000194954 1829 ntBASIC16.78■□□□□ 0.28
Clrn1Q8K445 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Clrn1Q8K445 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC16.78■□□□□ 0.28
Clrn1Q8K445 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC16.78■□□□□ 0.28
Clrn1Q8K445 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC16.78■□□□□ 0.28
Clrn1Q8K445 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Clrn1Q8K445 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Clrn1Q8K445 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Clrn1Q8K445 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Clrn1Q8K445 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC16.78■□□□□ 0.28
Clrn1Q8K445 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Clrn1Q8K445 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Clrn1Q8K445 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Clrn1Q8K445 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Clrn1Q8K445 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Clrn1Q8K445 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Clrn1Q8K445 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Clrn1Q8K445 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Clrn1Q8K445 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Clrn1Q8K445 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Clrn1Q8K445 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Clrn1Q8K445 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Clrn1Q8K445 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
Clrn1Q8K445 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Clrn1Q8K445 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Clrn1Q8K445 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC16.77■□□□□ 0.28
Clrn1Q8K445 CT025689.6-201ENSMUST00000224991 1104 ntBASIC16.77■□□□□ 0.28
Clrn1Q8K445 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Clrn1Q8K445 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Clrn1Q8K445 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Clrn1Q8K445 Dio3-201ENSMUST00000097228 1449 ntBASIC16.77■□□□□ 0.27
Clrn1Q8K445 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Clrn1Q8K445 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Clrn1Q8K445 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Clrn1Q8K445 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Clrn1Q8K445 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
Clrn1Q8K445 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Clrn1Q8K445 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Clrn1Q8K445 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Clrn1Q8K445 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Clrn1Q8K445 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Clrn1Q8K445 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC16.76■□□□□ 0.27
Clrn1Q8K445 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC16.76■□□□□ 0.27
Clrn1Q8K445 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Clrn1Q8K445 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Clrn1Q8K445 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Clrn1Q8K445 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC16.76■□□□□ 0.27
Clrn1Q8K445 Gm20049-201ENSMUST00000219950 730 ntBASIC16.76■□□□□ 0.27
Clrn1Q8K445 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC16.76■□□□□ 0.27
Clrn1Q8K445 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Clrn1Q8K445 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Clrn1Q8K445 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC16.76■□□□□ 0.27
Clrn1Q8K445 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Clrn1Q8K445 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC16.76■□□□□ 0.27
Clrn1Q8K445 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Clrn1Q8K445 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
Clrn1Q8K445 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Clrn1Q8K445 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
Clrn1Q8K445 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Clrn1Q8K445 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Clrn1Q8K445 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Clrn1Q8K445 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
Clrn1Q8K445 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Clrn1Q8K445 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Clrn1Q8K445 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Clrn1Q8K445 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Clrn1Q8K445 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Clrn1Q8K445 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Clrn1Q8K445 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Clrn1Q8K445 Gm21596-201ENSMUST00000178049 1316 ntBASIC16.74■□□□□ 0.27
Clrn1Q8K445 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Clrn1Q8K445 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Clrn1Q8K445 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Clrn1Q8K445 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC16.74■□□□□ 0.27
Clrn1Q8K445 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
Clrn1Q8K445 Gm27275-201ENSMUST00000184318 272 ntBASIC16.74■□□□□ 0.27
Clrn1Q8K445 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC16.74■□□□□ 0.27
Clrn1Q8K445 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Clrn1Q8K445 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Clrn1Q8K445 Mtag2-201ENSMUST00000058665 714 ntBASIC16.74■□□□□ 0.27
Clrn1Q8K445 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Clrn1Q8K445 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Clrn1Q8K445 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Clrn1Q8K445 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Clrn1Q8K445 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Clrn1Q8K445 Gm5828-201ENSMUST00000071842 1860 ntBASIC16.73■□□□□ 0.27
Clrn1Q8K445 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Clrn1Q8K445 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Clrn1Q8K445 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Clrn1Q8K445 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Clrn1Q8K445 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Clrn1Q8K445 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Clrn1Q8K445 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms