Protein–RNA interactions for Protein: Q8K3P5

Cnot6, CCR4-NOT transcription complex subunit 6, mousemouse

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cnot6Q8K3P5 Gm10461-201ENSMUST00000202073 4786 ntBASIC17.43■□□□□ 0.38
Cnot6Q8K3P5 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cnot6Q8K3P5 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Cnot6Q8K3P5 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Cnot6Q8K3P5 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cnot6Q8K3P5 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Cnot6Q8K3P5 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cnot6Q8K3P5 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Cnot6Q8K3P5 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
Cnot6Q8K3P5 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cnot6Q8K3P5 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cnot6Q8K3P5 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Cnot6Q8K3P5 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cnot6Q8K3P5 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC17.42■□□□□ 0.38
Cnot6Q8K3P5 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Cnot6Q8K3P5 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC17.42■□□□□ 0.38
Cnot6Q8K3P5 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cnot6Q8K3P5 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cnot6Q8K3P5 Gm42569-201ENSMUST00000200539 472 ntBASIC17.42■□□□□ 0.38
Cnot6Q8K3P5 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Cnot6Q8K3P5 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cnot6Q8K3P5 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cnot6Q8K3P5 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cnot6Q8K3P5 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cnot6Q8K3P5 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cnot6Q8K3P5 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC17.42■□□□□ 0.38
Cnot6Q8K3P5 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Cnot6Q8K3P5 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cnot6Q8K3P5 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Cnot6Q8K3P5 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cnot6Q8K3P5 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cnot6Q8K3P5 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC17.41■□□□□ 0.38
Cnot6Q8K3P5 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cnot6Q8K3P5 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Cnot6Q8K3P5 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cnot6Q8K3P5 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC17.41■□□□□ 0.38
Cnot6Q8K3P5 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cnot6Q8K3P5 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Cnot6Q8K3P5 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cnot6Q8K3P5 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cnot6Q8K3P5 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Cnot6Q8K3P5 Gm10167-201ENSMUST00000150411 1479 ntBASIC17.41■□□□□ 0.38
Cnot6Q8K3P5 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Cnot6Q8K3P5 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cnot6Q8K3P5 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cnot6Q8K3P5 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cnot6Q8K3P5 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Cnot6Q8K3P5 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
Cnot6Q8K3P5 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cnot6Q8K3P5 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Cnot6Q8K3P5 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cnot6Q8K3P5 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cnot6Q8K3P5 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC17.4■□□□□ 0.38
Cnot6Q8K3P5 Gm6420-201ENSMUST00000193885 723 ntBASIC17.4■□□□□ 0.38
Cnot6Q8K3P5 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
Cnot6Q8K3P5 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Cnot6Q8K3P5 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC17.4■□□□□ 0.38
Cnot6Q8K3P5 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cnot6Q8K3P5 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cnot6Q8K3P5 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Cnot6Q8K3P5 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cnot6Q8K3P5 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cnot6Q8K3P5 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC17.39■□□□□ 0.37
Cnot6Q8K3P5 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cnot6Q8K3P5 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cnot6Q8K3P5 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Cnot6Q8K3P5 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cnot6Q8K3P5 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Cnot6Q8K3P5 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cnot6Q8K3P5 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Cnot6Q8K3P5 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Cnot6Q8K3P5 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC17.39■□□□□ 0.37
Cnot6Q8K3P5 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cnot6Q8K3P5 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cnot6Q8K3P5 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Cnot6Q8K3P5 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Cnot6Q8K3P5 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cnot6Q8K3P5 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC17.39■□□□□ 0.37
Cnot6Q8K3P5 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cnot6Q8K3P5 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cnot6Q8K3P5 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Cnot6Q8K3P5 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cnot6Q8K3P5 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cnot6Q8K3P5 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cnot6Q8K3P5 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cnot6Q8K3P5 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cnot6Q8K3P5 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Cnot6Q8K3P5 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC17.38■□□□□ 0.37
Cnot6Q8K3P5 Gm19094-201ENSMUST00000209791 1246 ntBASIC17.38■□□□□ 0.37
Cnot6Q8K3P5 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cnot6Q8K3P5 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cnot6Q8K3P5 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Cnot6Q8K3P5 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Cnot6Q8K3P5 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Cnot6Q8K3P5 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC17.37■□□□□ 0.37
Cnot6Q8K3P5 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cnot6Q8K3P5 AC131586.2-201ENSMUST00000228370 1512 ntBASIC17.37■□□□□ 0.37
Cnot6Q8K3P5 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Cnot6Q8K3P5 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cnot6Q8K3P5 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms