Protein–RNA interactions for Protein: Q8K1R7

Nek9, Serine/threonine-protein kinase Nek9, mousemouse

Predictions only

Length 984 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nek9Q8K1R7 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Nek9Q8K1R7 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Nek9Q8K1R7 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Nek9Q8K1R7 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC20.66■□□□□ 0.9
Nek9Q8K1R7 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC20.66■□□□□ 0.9
Nek9Q8K1R7 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC20.66■□□□□ 0.9
Nek9Q8K1R7 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
Nek9Q8K1R7 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Nek9Q8K1R7 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC20.66■□□□□ 0.9
Nek9Q8K1R7 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC20.66■□□□□ 0.9
Nek9Q8K1R7 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Nek9Q8K1R7 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Nek9Q8K1R7 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Nek9Q8K1R7 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Nek9Q8K1R7 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Nek9Q8K1R7 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Nek9Q8K1R7 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Nek9Q8K1R7 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Nek9Q8K1R7 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Nek9Q8K1R7 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Nek9Q8K1R7 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Nek9Q8K1R7 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Nek9Q8K1R7 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC20.65■□□□□ 0.9
Nek9Q8K1R7 Gm17971-201ENSMUST00000190239 806 ntBASIC20.65■□□□□ 0.9
Nek9Q8K1R7 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Nek9Q8K1R7 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Nek9Q8K1R7 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Nek9Q8K1R7 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Nek9Q8K1R7 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Nek9Q8K1R7 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC20.64■□□□□ 0.9
Nek9Q8K1R7 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Nek9Q8K1R7 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC20.64■□□□□ 0.9
Nek9Q8K1R7 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Nek9Q8K1R7 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC20.64■□□□□ 0.89
Nek9Q8K1R7 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Nek9Q8K1R7 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
Nek9Q8K1R7 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Nek9Q8K1R7 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
Nek9Q8K1R7 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
Nek9Q8K1R7 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Nek9Q8K1R7 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC20.64■□□□□ 0.89
Nek9Q8K1R7 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Nek9Q8K1R7 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Nek9Q8K1R7 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Nek9Q8K1R7 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Nek9Q8K1R7 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC20.63■□□□□ 0.89
Nek9Q8K1R7 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Nek9Q8K1R7 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Nek9Q8K1R7 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC20.63■□□□□ 0.89
Nek9Q8K1R7 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Nek9Q8K1R7 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Nek9Q8K1R7 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Nek9Q8K1R7 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Nek9Q8K1R7 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Nek9Q8K1R7 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Nek9Q8K1R7 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Nek9Q8K1R7 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Nek9Q8K1R7 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Nek9Q8K1R7 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Nek9Q8K1R7 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Nek9Q8K1R7 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Nek9Q8K1R7 Gm14859-201ENSMUST00000117752 357 ntBASIC20.62■□□□□ 0.89
Nek9Q8K1R7 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Nek9Q8K1R7 Gm37292-201ENSMUST00000192062 758 ntBASIC20.62■□□□□ 0.89
Nek9Q8K1R7 Gm42545-201ENSMUST00000202755 922 ntBASIC20.62■□□□□ 0.89
Nek9Q8K1R7 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Nek9Q8K1R7 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Nek9Q8K1R7 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
Nek9Q8K1R7 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Nek9Q8K1R7 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Nek9Q8K1R7 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC20.62■□□□□ 0.89
Nek9Q8K1R7 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Nek9Q8K1R7 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Nek9Q8K1R7 Gm45606-201ENSMUST00000209836 2795 ntBASIC20.61■□□□□ 0.89
Nek9Q8K1R7 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Nek9Q8K1R7 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Nek9Q8K1R7 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC20.61■□□□□ 0.89
Nek9Q8K1R7 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Nek9Q8K1R7 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Nek9Q8K1R7 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC20.61■□□□□ 0.89
Nek9Q8K1R7 Gm10138-203ENSMUST00000206952 366 ntBASIC20.61■□□□□ 0.89
Nek9Q8K1R7 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Nek9Q8K1R7 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Nek9Q8K1R7 Gm44832-201ENSMUST00000208849 2303 ntBASIC20.61■□□□□ 0.89
Nek9Q8K1R7 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Nek9Q8K1R7 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Nek9Q8K1R7 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Nek9Q8K1R7 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Nek9Q8K1R7 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Nek9Q8K1R7 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Nek9Q8K1R7 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Nek9Q8K1R7 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Nek9Q8K1R7 Gm12382-201ENSMUST00000122005 922 ntBASIC20.6■□□□□ 0.89
Nek9Q8K1R7 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC20.6■□□□□ 0.89
Nek9Q8K1R7 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC20.6■□□□□ 0.89
Nek9Q8K1R7 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Nek9Q8K1R7 AC130713.1-201ENSMUST00000228853 1096 ntBASIC20.6■□□□□ 0.89
Nek9Q8K1R7 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Nek9Q8K1R7 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Nek9Q8K1R7 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms