Protein–RNA interactions for Protein: Q8K0V4

Cnot3, CCR4-NOT transcription complex subunit 3, mousemouse

Known RBP Predictions only

Length 751 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cnot3Q8K0V4 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cnot3Q8K0V4 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Cnot3Q8K0V4 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cnot3Q8K0V4 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Cnot3Q8K0V4 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Cnot3Q8K0V4 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cnot3Q8K0V4 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cnot3Q8K0V4 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC16.73■□□□□ 0.27
Cnot3Q8K0V4 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cnot3Q8K0V4 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Cnot3Q8K0V4 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cnot3Q8K0V4 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Cnot3Q8K0V4 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cnot3Q8K0V4 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cnot3Q8K0V4 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cnot3Q8K0V4 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Cnot3Q8K0V4 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cnot3Q8K0V4 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Cnot3Q8K0V4 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cnot3Q8K0V4 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC16.72■□□□□ 0.27
Cnot3Q8K0V4 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC16.72■□□□□ 0.27
Cnot3Q8K0V4 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
Cnot3Q8K0V4 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cnot3Q8K0V4 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cnot3Q8K0V4 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cnot3Q8K0V4 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cnot3Q8K0V4 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Cnot3Q8K0V4 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC16.72■□□□□ 0.27
Cnot3Q8K0V4 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cnot3Q8K0V4 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cnot3Q8K0V4 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cnot3Q8K0V4 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cnot3Q8K0V4 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Cnot3Q8K0V4 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cnot3Q8K0V4 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC16.71■□□□□ 0.27
Cnot3Q8K0V4 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cnot3Q8K0V4 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC16.71■□□□□ 0.27
Cnot3Q8K0V4 Ddx41-204ENSMUST00000224765 2199 ntBASIC16.71■□□□□ 0.27
Cnot3Q8K0V4 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cnot3Q8K0V4 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Cnot3Q8K0V4 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Cnot3Q8K0V4 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cnot3Q8K0V4 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cnot3Q8K0V4 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cnot3Q8K0V4 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Cnot3Q8K0V4 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Cnot3Q8K0V4 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Cnot3Q8K0V4 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cnot3Q8K0V4 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cnot3Q8K0V4 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Cnot3Q8K0V4 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cnot3Q8K0V4 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cnot3Q8K0V4 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC16.7■□□□□ 0.26
Cnot3Q8K0V4 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Cnot3Q8K0V4 Gm26833-201ENSMUST00000180899 440 ntBASIC16.7■□□□□ 0.26
Cnot3Q8K0V4 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
Cnot3Q8K0V4 Gm40848-201ENSMUST00000221998 324 ntBASIC16.7■□□□□ 0.26
Cnot3Q8K0V4 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC16.7■□□□□ 0.26
Cnot3Q8K0V4 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cnot3Q8K0V4 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Cnot3Q8K0V4 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cnot3Q8K0V4 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cnot3Q8K0V4 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Cnot3Q8K0V4 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cnot3Q8K0V4 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cnot3Q8K0V4 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cnot3Q8K0V4 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC16.69■□□□□ 0.26
Cnot3Q8K0V4 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cnot3Q8K0V4 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC16.69■□□□□ 0.26
Cnot3Q8K0V4 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC16.69■□□□□ 0.26
Cnot3Q8K0V4 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC16.69■□□□□ 0.26
Cnot3Q8K0V4 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
Cnot3Q8K0V4 AC160393.1-201ENSMUST00000218378 1279 ntBASIC16.69■□□□□ 0.26
Cnot3Q8K0V4 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Cnot3Q8K0V4 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cnot3Q8K0V4 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cnot3Q8K0V4 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Cnot3Q8K0V4 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC16.69■□□□□ 0.26
Cnot3Q8K0V4 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Cnot3Q8K0V4 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cnot3Q8K0V4 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Cnot3Q8K0V4 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Cnot3Q8K0V4 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cnot3Q8K0V4 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Cnot3Q8K0V4 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cnot3Q8K0V4 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cnot3Q8K0V4 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cnot3Q8K0V4 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Cnot3Q8K0V4 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cnot3Q8K0V4 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cnot3Q8K0V4 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Cnot3Q8K0V4 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cnot3Q8K0V4 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC16.68■□□□□ 0.26
Cnot3Q8K0V4 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Cnot3Q8K0V4 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC16.68■□□□□ 0.26
Cnot3Q8K0V4 Gm13241-201ENSMUST00000094493 780 ntBASIC16.68■□□□□ 0.26
Cnot3Q8K0V4 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC16.68■□□□□ 0.26
Cnot3Q8K0V4 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cnot3Q8K0V4 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Cnot3Q8K0V4 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms