Protein–RNA interactions for Protein: Q8CGW4

Sox30, Transcription factor SOX-30, mousemouse

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox30Q8CGW4 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Sox30Q8CGW4 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Sox30Q8CGW4 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC19.47■□□□□ 0.71
Sox30Q8CGW4 Gm16401-202ENSMUST00000197463 2074 ntBASIC19.47■□□□□ 0.71
Sox30Q8CGW4 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Sox30Q8CGW4 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Sox30Q8CGW4 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Sox30Q8CGW4 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Sox30Q8CGW4 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Sox30Q8CGW4 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Sox30Q8CGW4 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC19.46■□□□□ 0.71
Sox30Q8CGW4 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC19.46■□□□□ 0.71
Sox30Q8CGW4 Zfp783-201ENSMUST00000095946 670 ntBASIC19.46■□□□□ 0.71
Sox30Q8CGW4 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Sox30Q8CGW4 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Sox30Q8CGW4 Gm45774-201ENSMUST00000211992 2665 ntBASIC19.46■□□□□ 0.71
Sox30Q8CGW4 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Sox30Q8CGW4 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Sox30Q8CGW4 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Sox30Q8CGW4 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Sox30Q8CGW4 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Sox30Q8CGW4 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Sox30Q8CGW4 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Sox30Q8CGW4 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Sox30Q8CGW4 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Sox30Q8CGW4 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Sox30Q8CGW4 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Sox30Q8CGW4 Mir2861-201ENSMUST00000175539 82 ntBASIC19.45■□□□□ 0.7
Sox30Q8CGW4 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC19.45■□□□□ 0.7
Sox30Q8CGW4 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Sox30Q8CGW4 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Sox30Q8CGW4 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Sox30Q8CGW4 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Sox30Q8CGW4 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Sox30Q8CGW4 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Sox30Q8CGW4 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Sox30Q8CGW4 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Sox30Q8CGW4 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Sox30Q8CGW4 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC19.44■□□□□ 0.7
Sox30Q8CGW4 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Sox30Q8CGW4 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Sox30Q8CGW4 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Sox30Q8CGW4 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC19.44■□□□□ 0.7
Sox30Q8CGW4 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Sox30Q8CGW4 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Sox30Q8CGW4 Wnt10b-205ENSMUST00000226846 1204 ntBASIC19.44■□□□□ 0.7
Sox30Q8CGW4 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Sox30Q8CGW4 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Sox30Q8CGW4 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Sox30Q8CGW4 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Sox30Q8CGW4 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Sox30Q8CGW4 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Sox30Q8CGW4 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC19.43■□□□□ 0.7
Sox30Q8CGW4 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Sox30Q8CGW4 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Sox30Q8CGW4 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sox30Q8CGW4 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sox30Q8CGW4 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sox30Q8CGW4 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Sox30Q8CGW4 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sox30Q8CGW4 Gm13216-201ENSMUST00000117145 591 ntBASIC19.42■□□□□ 0.7
Sox30Q8CGW4 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sox30Q8CGW4 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sox30Q8CGW4 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Sox30Q8CGW4 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Sox30Q8CGW4 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Sox30Q8CGW4 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sox30Q8CGW4 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sox30Q8CGW4 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sox30Q8CGW4 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sox30Q8CGW4 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sox30Q8CGW4 Gm2399-201ENSMUST00000104944 225 ntBASIC19.41■□□□□ 0.7
Sox30Q8CGW4 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC19.41■□□□□ 0.7
Sox30Q8CGW4 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC19.41■□□□□ 0.7
Sox30Q8CGW4 Gm37820-201ENSMUST00000194021 2147 ntBASIC19.41■□□□□ 0.7
Sox30Q8CGW4 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC19.41■□□□□ 0.7
Sox30Q8CGW4 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC19.41■□□□□ 0.7
Sox30Q8CGW4 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Sox30Q8CGW4 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sox30Q8CGW4 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sox30Q8CGW4 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sox30Q8CGW4 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sox30Q8CGW4 Gm45412-201ENSMUST00000210217 2275 ntBASIC19.41■□□□□ 0.7
Sox30Q8CGW4 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sox30Q8CGW4 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Sox30Q8CGW4 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sox30Q8CGW4 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Sox30Q8CGW4 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Sox30Q8CGW4 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Sox30Q8CGW4 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Sox30Q8CGW4 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC19.4■□□□□ 0.7
Sox30Q8CGW4 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC19.4■□□□□ 0.7
Sox30Q8CGW4 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Sox30Q8CGW4 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Sox30Q8CGW4 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Sox30Q8CGW4 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Sox30Q8CGW4 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Sox30Q8CGW4 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Sox30Q8CGW4 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC19.39■□□□□ 0.69
Sox30Q8CGW4 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 68.9 ms