Protein–RNA interactions for Protein: Q8CGV4

Rdh1, MCG140848, mousemouse

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rdh1Q8CGV4 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rdh1Q8CGV4 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rdh1Q8CGV4 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rdh1Q8CGV4 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Rdh1Q8CGV4 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Rdh1Q8CGV4 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Rdh1Q8CGV4 Gm12085-201ENSMUST00000119263 940 ntBASIC17.26■□□□□ 0.35
Rdh1Q8CGV4 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Rdh1Q8CGV4 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC17.26■□□□□ 0.35
Rdh1Q8CGV4 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Rdh1Q8CGV4 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Rdh1Q8CGV4 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Rdh1Q8CGV4 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Rdh1Q8CGV4 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rdh1Q8CGV4 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rdh1Q8CGV4 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rdh1Q8CGV4 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Rdh1Q8CGV4 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rdh1Q8CGV4 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rdh1Q8CGV4 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rdh1Q8CGV4 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Rdh1Q8CGV4 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rdh1Q8CGV4 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rdh1Q8CGV4 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Rdh1Q8CGV4 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rdh1Q8CGV4 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Rdh1Q8CGV4 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Rdh1Q8CGV4 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC17.25■□□□□ 0.35
Rdh1Q8CGV4 Gm4974-201ENSMUST00000209974 875 ntBASIC17.25■□□□□ 0.35
Rdh1Q8CGV4 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Rdh1Q8CGV4 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Rdh1Q8CGV4 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rdh1Q8CGV4 Gm37374-201ENSMUST00000194954 1829 ntBASIC17.25■□□□□ 0.35
Rdh1Q8CGV4 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rdh1Q8CGV4 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rdh1Q8CGV4 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rdh1Q8CGV4 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC17.24■□□□□ 0.35
Rdh1Q8CGV4 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rdh1Q8CGV4 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rdh1Q8CGV4 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rdh1Q8CGV4 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rdh1Q8CGV4 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Rdh1Q8CGV4 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rdh1Q8CGV4 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Rdh1Q8CGV4 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Rdh1Q8CGV4 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC17.24■□□□□ 0.35
Rdh1Q8CGV4 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Rdh1Q8CGV4 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC17.24■□□□□ 0.35
Rdh1Q8CGV4 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC17.24■□□□□ 0.35
Rdh1Q8CGV4 Gm9694-201ENSMUST00000193347 1189 ntBASIC17.24■□□□□ 0.35
Rdh1Q8CGV4 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
Rdh1Q8CGV4 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rdh1Q8CGV4 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rdh1Q8CGV4 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rdh1Q8CGV4 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Rdh1Q8CGV4 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rdh1Q8CGV4 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rdh1Q8CGV4 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rdh1Q8CGV4 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rdh1Q8CGV4 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rdh1Q8CGV4 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC17.23■□□□□ 0.35
Rdh1Q8CGV4 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rdh1Q8CGV4 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rdh1Q8CGV4 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rdh1Q8CGV4 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC17.23■□□□□ 0.35
Rdh1Q8CGV4 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
Rdh1Q8CGV4 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC17.23■□□□□ 0.35
Rdh1Q8CGV4 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rdh1Q8CGV4 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rdh1Q8CGV4 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Rdh1Q8CGV4 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rdh1Q8CGV4 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rdh1Q8CGV4 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rdh1Q8CGV4 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Rdh1Q8CGV4 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rdh1Q8CGV4 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Rdh1Q8CGV4 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rdh1Q8CGV4 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rdh1Q8CGV4 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rdh1Q8CGV4 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rdh1Q8CGV4 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC17.22■□□□□ 0.35
Rdh1Q8CGV4 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC17.22■□□□□ 0.35
Rdh1Q8CGV4 Gm29994-201ENSMUST00000195495 1193 ntBASIC17.22■□□□□ 0.35
Rdh1Q8CGV4 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rdh1Q8CGV4 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rdh1Q8CGV4 Gm9987-201ENSMUST00000069768 567 ntBASIC17.22■□□□□ 0.35
Rdh1Q8CGV4 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rdh1Q8CGV4 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
Rdh1Q8CGV4 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rdh1Q8CGV4 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rdh1Q8CGV4 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rdh1Q8CGV4 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC17.21■□□□□ 0.35
Rdh1Q8CGV4 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rdh1Q8CGV4 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rdh1Q8CGV4 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Rdh1Q8CGV4 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rdh1Q8CGV4 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rdh1Q8CGV4 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Rdh1Q8CGV4 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rdh1Q8CGV4 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms