Protein–RNA interactions for Protein: Q8CG50

Rab43, Ras-related protein Rab-43, mousemouse

Predictions only

Length 210 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab43Q8CG50 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Rab43Q8CG50 Gm45058-201ENSMUST00000205810 766 ntBASIC17.31■□□□□ 0.36
Rab43Q8CG50 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rab43Q8CG50 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rab43Q8CG50 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rab43Q8CG50 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Rab43Q8CG50 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Rab43Q8CG50 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rab43Q8CG50 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rab43Q8CG50 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rab43Q8CG50 BC021767-201ENSMUST00000126387 1716 ntBASIC17.3■□□□□ 0.36
Rab43Q8CG50 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rab43Q8CG50 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rab43Q8CG50 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Rab43Q8CG50 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rab43Q8CG50 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rab43Q8CG50 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rab43Q8CG50 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rab43Q8CG50 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rab43Q8CG50 Gm10013-201ENSMUST00000106074 672 ntBASIC17.3■□□□□ 0.36
Rab43Q8CG50 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Rab43Q8CG50 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC17.3■□□□□ 0.36
Rab43Q8CG50 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rab43Q8CG50 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC17.3■□□□□ 0.36
Rab43Q8CG50 Gm2274-201ENSMUST00000184539 609 ntBASIC17.3■□□□□ 0.36
Rab43Q8CG50 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC17.3■□□□□ 0.36
Rab43Q8CG50 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rab43Q8CG50 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Rab43Q8CG50 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rab43Q8CG50 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rab43Q8CG50 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rab43Q8CG50 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rab43Q8CG50 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rab43Q8CG50 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rab43Q8CG50 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Rab43Q8CG50 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rab43Q8CG50 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Rab43Q8CG50 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rab43Q8CG50 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Rab43Q8CG50 Gm10418-201ENSMUST00000100943 576 ntBASIC17.29■□□□□ 0.36
Rab43Q8CG50 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Rab43Q8CG50 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Rab43Q8CG50 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
Rab43Q8CG50 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC17.29■□□□□ 0.36
Rab43Q8CG50 Gm21362-201ENSMUST00000194272 928 ntBASIC17.29■□□□□ 0.36
Rab43Q8CG50 Gm43353-201ENSMUST00000199224 1295 ntBASIC17.29■□□□□ 0.36
Rab43Q8CG50 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Rab43Q8CG50 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC17.29■□□□□ 0.36
Rab43Q8CG50 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC17.29■□□□□ 0.36
Rab43Q8CG50 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC17.29■□□□□ 0.36
Rab43Q8CG50 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rab43Q8CG50 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
Rab43Q8CG50 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Rab43Q8CG50 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rab43Q8CG50 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rab43Q8CG50 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rab43Q8CG50 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rab43Q8CG50 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Rab43Q8CG50 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Rab43Q8CG50 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rab43Q8CG50 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC17.28■□□□□ 0.36
Rab43Q8CG50 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Rab43Q8CG50 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Rab43Q8CG50 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rab43Q8CG50 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rab43Q8CG50 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC17.28■□□□□ 0.36
Rab43Q8CG50 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Rab43Q8CG50 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rab43Q8CG50 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rab43Q8CG50 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Rab43Q8CG50 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Rab43Q8CG50 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC17.28■□□□□ 0.36
Rab43Q8CG50 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rab43Q8CG50 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Rab43Q8CG50 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rab43Q8CG50 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rab43Q8CG50 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rab43Q8CG50 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC17.27■□□□□ 0.36
Rab43Q8CG50 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rab43Q8CG50 Mir5130-201ENSMUST00000175160 84 ntBASIC17.27■□□□□ 0.36
Rab43Q8CG50 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC17.27■□□□□ 0.36
Rab43Q8CG50 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC17.27■□□□□ 0.36
Rab43Q8CG50 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC17.27■□□□□ 0.36
Rab43Q8CG50 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rab43Q8CG50 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rab43Q8CG50 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Rab43Q8CG50 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Rab43Q8CG50 Gm38308-201ENSMUST00000194934 1809 ntBASIC17.26■□□□□ 0.35
Rab43Q8CG50 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Rab43Q8CG50 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Rab43Q8CG50 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rab43Q8CG50 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Rab43Q8CG50 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Rab43Q8CG50 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rab43Q8CG50 Gm7367-201ENSMUST00000057611 492 ntBASIC17.26■□□□□ 0.35
Rab43Q8CG50 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rab43Q8CG50 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Rab43Q8CG50 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rab43Q8CG50 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Rab43Q8CG50 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC17.26■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms