Protein–RNA interactions for Protein: Q8CDY9

Pcdhb7, Protocadherin beta 7, mousemouse

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb7Q8CDY9 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Pcdhb7Q8CDY9 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Pcdhb7Q8CDY9 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Pcdhb7Q8CDY9 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Pcdhb7Q8CDY9 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Pcdhb7Q8CDY9 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhb7Q8CDY9 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhb7Q8CDY9 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhb7Q8CDY9 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhb7Q8CDY9 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhb7Q8CDY9 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhb7Q8CDY9 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhb7Q8CDY9 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Pcdhb7Q8CDY9 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhb7Q8CDY9 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhb7Q8CDY9 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhb7Q8CDY9 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Pcdhb7Q8CDY9 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhb7Q8CDY9 Gm12933-201ENSMUST00000120203 872 ntBASIC17.82■□□□□ 0.44
Pcdhb7Q8CDY9 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhb7Q8CDY9 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhb7Q8CDY9 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhb7Q8CDY9 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhb7Q8CDY9 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhb7Q8CDY9 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Pcdhb7Q8CDY9 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Pcdhb7Q8CDY9 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
Pcdhb7Q8CDY9 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhb7Q8CDY9 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhb7Q8CDY9 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhb7Q8CDY9 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhb7Q8CDY9 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhb7Q8CDY9 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhb7Q8CDY9 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhb7Q8CDY9 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhb7Q8CDY9 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhb7Q8CDY9 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhb7Q8CDY9 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhb7Q8CDY9 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC17.81■□□□□ 0.44
Pcdhb7Q8CDY9 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhb7Q8CDY9 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Pcdhb7Q8CDY9 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC17.81■□□□□ 0.44
Pcdhb7Q8CDY9 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhb7Q8CDY9 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhb7Q8CDY9 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhb7Q8CDY9 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhb7Q8CDY9 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhb7Q8CDY9 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhb7Q8CDY9 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhb7Q8CDY9 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhb7Q8CDY9 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC17.8■□□□□ 0.44
Pcdhb7Q8CDY9 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC17.8■□□□□ 0.44
Pcdhb7Q8CDY9 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhb7Q8CDY9 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhb7Q8CDY9 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhb7Q8CDY9 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC17.8■□□□□ 0.44
Pcdhb7Q8CDY9 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Pcdhb7Q8CDY9 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC17.8■□□□□ 0.44
Pcdhb7Q8CDY9 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Pcdhb7Q8CDY9 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC17.8■□□□□ 0.44
Pcdhb7Q8CDY9 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhb7Q8CDY9 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhb7Q8CDY9 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhb7Q8CDY9 Zcchc6-207ENSMUST00000225576 2499 ntBASIC17.8■□□□□ 0.44
Pcdhb7Q8CDY9 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhb7Q8CDY9 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC17.8■□□□□ 0.44
Pcdhb7Q8CDY9 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Pcdhb7Q8CDY9 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhb7Q8CDY9 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC17.8■□□□□ 0.44
Pcdhb7Q8CDY9 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhb7Q8CDY9 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhb7Q8CDY9 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhb7Q8CDY9 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhb7Q8CDY9 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhb7Q8CDY9 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
Pcdhb7Q8CDY9 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhb7Q8CDY9 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhb7Q8CDY9 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhb7Q8CDY9 Gm10602-201ENSMUST00000098239 609 ntBASIC17.79■□□□□ 0.44
Pcdhb7Q8CDY9 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Pcdhb7Q8CDY9 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhb7Q8CDY9 Fcho2-208ENSMUST00000224992 2964 ntBASIC17.79■□□□□ 0.44
Pcdhb7Q8CDY9 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Pcdhb7Q8CDY9 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
Pcdhb7Q8CDY9 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Pcdhb7Q8CDY9 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Pcdhb7Q8CDY9 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhb7Q8CDY9 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhb7Q8CDY9 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhb7Q8CDY9 Gm13148-201ENSMUST00000118892 745 ntBASIC17.78■□□□□ 0.44
Pcdhb7Q8CDY9 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Pcdhb7Q8CDY9 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC17.78■□□□□ 0.44
Pcdhb7Q8CDY9 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhb7Q8CDY9 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC17.78■□□□□ 0.44
Pcdhb7Q8CDY9 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhb7Q8CDY9 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhb7Q8CDY9 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhb7Q8CDY9 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhb7Q8CDY9 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhb7Q8CDY9 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms