Protein–RNA interactions for Protein: Q8CDN8

Ccdc38, Coiled-coil domain-containing protein 38, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38Q8CDN8 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ccdc38Q8CDN8 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Ccdc38Q8CDN8 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Ccdc38Q8CDN8 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ccdc38Q8CDN8 Mir5133-201ENSMUST00000174955 77 ntBASIC19.72■□□□□ 0.75
Ccdc38Q8CDN8 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ccdc38Q8CDN8 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ccdc38Q8CDN8 Zfp783-201ENSMUST00000095946 670 ntBASIC19.72■□□□□ 0.75
Ccdc38Q8CDN8 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ccdc38Q8CDN8 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Ccdc38Q8CDN8 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ccdc38Q8CDN8 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ccdc38Q8CDN8 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC19.71■□□□□ 0.75
Ccdc38Q8CDN8 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ccdc38Q8CDN8 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC19.71■□□□□ 0.75
Ccdc38Q8CDN8 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Ccdc38Q8CDN8 Rab3c-203ENSMUST00000224180 967 ntBASIC19.71■□□□□ 0.75
Ccdc38Q8CDN8 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ccdc38Q8CDN8 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
Ccdc38Q8CDN8 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC19.71■□□□□ 0.75
Ccdc38Q8CDN8 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Ccdc38Q8CDN8 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ccdc38Q8CDN8 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Ccdc38Q8CDN8 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Ccdc38Q8CDN8 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ccdc38Q8CDN8 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ccdc38Q8CDN8 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ccdc38Q8CDN8 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ccdc38Q8CDN8 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
Ccdc38Q8CDN8 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Ccdc38Q8CDN8 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ccdc38Q8CDN8 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC19.7■□□□□ 0.74
Ccdc38Q8CDN8 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ccdc38Q8CDN8 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Ccdc38Q8CDN8 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ccdc38Q8CDN8 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Ccdc38Q8CDN8 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ccdc38Q8CDN8 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ccdc38Q8CDN8 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ccdc38Q8CDN8 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ccdc38Q8CDN8 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ccdc38Q8CDN8 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Ccdc38Q8CDN8 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ccdc38Q8CDN8 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ccdc38Q8CDN8 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ccdc38Q8CDN8 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ccdc38Q8CDN8 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC19.69■□□□□ 0.74
Ccdc38Q8CDN8 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC19.69■□□□□ 0.74
Ccdc38Q8CDN8 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Ccdc38Q8CDN8 Gm37179-201ENSMUST00000194862 823 ntBASIC19.69■□□□□ 0.74
Ccdc38Q8CDN8 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ccdc38Q8CDN8 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC19.69■□□□□ 0.74
Ccdc38Q8CDN8 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC19.69■□□□□ 0.74
Ccdc38Q8CDN8 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC19.69■□□□□ 0.74
Ccdc38Q8CDN8 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Ccdc38Q8CDN8 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC19.69■□□□□ 0.74
Ccdc38Q8CDN8 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ccdc38Q8CDN8 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ccdc38Q8CDN8 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Ccdc38Q8CDN8 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ccdc38Q8CDN8 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ccdc38Q8CDN8 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ccdc38Q8CDN8 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ccdc38Q8CDN8 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ccdc38Q8CDN8 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC19.68■□□□□ 0.74
Ccdc38Q8CDN8 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ccdc38Q8CDN8 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Ccdc38Q8CDN8 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ccdc38Q8CDN8 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ccdc38Q8CDN8 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC19.68■□□□□ 0.74
Ccdc38Q8CDN8 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ccdc38Q8CDN8 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ccdc38Q8CDN8 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Ccdc38Q8CDN8 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ccdc38Q8CDN8 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ccdc38Q8CDN8 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ccdc38Q8CDN8 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ccdc38Q8CDN8 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ccdc38Q8CDN8 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Ccdc38Q8CDN8 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ccdc38Q8CDN8 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ccdc38Q8CDN8 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ccdc38Q8CDN8 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Ccdc38Q8CDN8 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Ccdc38Q8CDN8 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Ccdc38Q8CDN8 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ccdc38Q8CDN8 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ccdc38Q8CDN8 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ccdc38Q8CDN8 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ccdc38Q8CDN8 Gm12933-201ENSMUST00000120203 872 ntBASIC19.67■□□□□ 0.74
Ccdc38Q8CDN8 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ccdc38Q8CDN8 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ccdc38Q8CDN8 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ccdc38Q8CDN8 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ccdc38Q8CDN8 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ccdc38Q8CDN8 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ccdc38Q8CDN8 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Ccdc38Q8CDN8 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ccdc38Q8CDN8 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ccdc38Q8CDN8 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 67.8 ms