Protein–RNA interactions for Protein: Q8CAE3

Kcnmb1, Calcium-activated potassium channel subunit beta-1, mousemouse

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kcnmb1Q8CAE3 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Kcnmb1Q8CAE3 Gm5075-201ENSMUST00000196916 622 ntBASIC16.39■□□□□ 0.21
Kcnmb1Q8CAE3 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Kcnmb1Q8CAE3 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC16.39■□□□□ 0.21
Kcnmb1Q8CAE3 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC16.39■□□□□ 0.21
Kcnmb1Q8CAE3 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Kcnmb1Q8CAE3 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Kcnmb1Q8CAE3 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Kcnmb1Q8CAE3 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Kcnmb1Q8CAE3 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Kcnmb1Q8CAE3 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Kcnmb1Q8CAE3 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Kcnmb1Q8CAE3 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Kcnmb1Q8CAE3 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Kcnmb1Q8CAE3 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC16.39■□□□□ 0.21
Kcnmb1Q8CAE3 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Kcnmb1Q8CAE3 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Kcnmb1Q8CAE3 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Kcnmb1Q8CAE3 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Kcnmb1Q8CAE3 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Kcnmb1Q8CAE3 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Kcnmb1Q8CAE3 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Kcnmb1Q8CAE3 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Kcnmb1Q8CAE3 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Kcnmb1Q8CAE3 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Kcnmb1Q8CAE3 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Kcnmb1Q8CAE3 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
Kcnmb1Q8CAE3 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Kcnmb1Q8CAE3 Gm8969-201ENSMUST00000199694 526 ntBASIC16.38■□□□□ 0.21
Kcnmb1Q8CAE3 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Kcnmb1Q8CAE3 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Kcnmb1Q8CAE3 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Kcnmb1Q8CAE3 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Kcnmb1Q8CAE3 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Kcnmb1Q8CAE3 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC16.38■□□□□ 0.21
Kcnmb1Q8CAE3 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC16.38■□□□□ 0.21
Kcnmb1Q8CAE3 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Kcnmb1Q8CAE3 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Kcnmb1Q8CAE3 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Kcnmb1Q8CAE3 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Kcnmb1Q8CAE3 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Kcnmb1Q8CAE3 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Kcnmb1Q8CAE3 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Kcnmb1Q8CAE3 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Kcnmb1Q8CAE3 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Kcnmb1Q8CAE3 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Kcnmb1Q8CAE3 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC16.37■□□□□ 0.21
Kcnmb1Q8CAE3 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Kcnmb1Q8CAE3 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Kcnmb1Q8CAE3 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Kcnmb1Q8CAE3 Gm6211-202ENSMUST00000167849 925 ntBASIC16.37■□□□□ 0.21
Kcnmb1Q8CAE3 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Kcnmb1Q8CAE3 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Kcnmb1Q8CAE3 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Kcnmb1Q8CAE3 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Kcnmb1Q8CAE3 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Kcnmb1Q8CAE3 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Kcnmb1Q8CAE3 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Kcnmb1Q8CAE3 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Kcnmb1Q8CAE3 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Kcnmb1Q8CAE3 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Kcnmb1Q8CAE3 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Kcnmb1Q8CAE3 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Kcnmb1Q8CAE3 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Kcnmb1Q8CAE3 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Kcnmb1Q8CAE3 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Kcnmb1Q8CAE3 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Kcnmb1Q8CAE3 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Kcnmb1Q8CAE3 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Kcnmb1Q8CAE3 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Kcnmb1Q8CAE3 Gm8495-201ENSMUST00000188740 694 ntBASIC16.36■□□□□ 0.21
Kcnmb1Q8CAE3 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
Kcnmb1Q8CAE3 Gm19439-201ENSMUST00000198195 2273 ntBASIC16.36■□□□□ 0.21
Kcnmb1Q8CAE3 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Kcnmb1Q8CAE3 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Kcnmb1Q8CAE3 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Kcnmb1Q8CAE3 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Kcnmb1Q8CAE3 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Kcnmb1Q8CAE3 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC16.36■□□□□ 0.21
Kcnmb1Q8CAE3 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Kcnmb1Q8CAE3 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Kcnmb1Q8CAE3 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC16.35■□□□□ 0.21
Kcnmb1Q8CAE3 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Kcnmb1Q8CAE3 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Kcnmb1Q8CAE3 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Kcnmb1Q8CAE3 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Kcnmb1Q8CAE3 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Kcnmb1Q8CAE3 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Kcnmb1Q8CAE3 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Kcnmb1Q8CAE3 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC16.35■□□□□ 0.21
Kcnmb1Q8CAE3 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Kcnmb1Q8CAE3 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Kcnmb1Q8CAE3 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Kcnmb1Q8CAE3 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Kcnmb1Q8CAE3 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Kcnmb1Q8CAE3 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Kcnmb1Q8CAE3 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Kcnmb1Q8CAE3 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Kcnmb1Q8CAE3 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Kcnmb1Q8CAE3 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 16.5 ms