Protein–RNA interactions for Protein: Q8CA71

Shisa4, Protein shisa-4, mousemouse

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa4Q8CA71 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Shisa4Q8CA71 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC20.74■□□□□ 0.91
Shisa4Q8CA71 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
Shisa4Q8CA71 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Shisa4Q8CA71 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Shisa4Q8CA71 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC20.73■□□□□ 0.91
Shisa4Q8CA71 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC20.73■□□□□ 0.91
Shisa4Q8CA71 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC20.73■□□□□ 0.91
Shisa4Q8CA71 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Shisa4Q8CA71 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Shisa4Q8CA71 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
Shisa4Q8CA71 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Shisa4Q8CA71 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Shisa4Q8CA71 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC20.73■□□□□ 0.91
Shisa4Q8CA71 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Shisa4Q8CA71 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Shisa4Q8CA71 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Shisa4Q8CA71 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Shisa4Q8CA71 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
Shisa4Q8CA71 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Shisa4Q8CA71 Gm12382-201ENSMUST00000122005 922 ntBASIC20.72■□□□□ 0.91
Shisa4Q8CA71 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC20.72■□□□□ 0.91
Shisa4Q8CA71 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Shisa4Q8CA71 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC20.72■□□□□ 0.91
Shisa4Q8CA71 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC20.72■□□□□ 0.91
Shisa4Q8CA71 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC20.72■□□□□ 0.91
Shisa4Q8CA71 Gm9484-201ENSMUST00000195892 1159 ntBASIC20.72■□□□□ 0.91
Shisa4Q8CA71 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Shisa4Q8CA71 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Shisa4Q8CA71 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Shisa4Q8CA71 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Shisa4Q8CA71 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Shisa4Q8CA71 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Shisa4Q8CA71 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Shisa4Q8CA71 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Shisa4Q8CA71 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Shisa4Q8CA71 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC20.71■□□□□ 0.91
Shisa4Q8CA71 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Shisa4Q8CA71 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Shisa4Q8CA71 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Shisa4Q8CA71 Gm15565-201ENSMUST00000118890 427 ntBASIC20.71■□□□□ 0.91
Shisa4Q8CA71 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Shisa4Q8CA71 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Shisa4Q8CA71 Mir8112-201ENSMUST00000184382 131 ntBASIC20.71■□□□□ 0.91
Shisa4Q8CA71 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Shisa4Q8CA71 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC20.71■□□□□ 0.91
Shisa4Q8CA71 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Shisa4Q8CA71 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC20.7■□□□□ 0.9
Shisa4Q8CA71 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Shisa4Q8CA71 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Shisa4Q8CA71 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Shisa4Q8CA71 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Shisa4Q8CA71 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Shisa4Q8CA71 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Shisa4Q8CA71 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Shisa4Q8CA71 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Shisa4Q8CA71 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Shisa4Q8CA71 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Shisa4Q8CA71 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Shisa4Q8CA71 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Shisa4Q8CA71 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Shisa4Q8CA71 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Shisa4Q8CA71 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC20.69■□□□□ 0.9
Shisa4Q8CA71 Gm16042-201ENSMUST00000204813 1247 ntBASIC20.69■□□□□ 0.9
Shisa4Q8CA71 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Shisa4Q8CA71 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Shisa4Q8CA71 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Shisa4Q8CA71 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
Shisa4Q8CA71 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC20.69■□□□□ 0.9
Shisa4Q8CA71 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Shisa4Q8CA71 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Shisa4Q8CA71 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Shisa4Q8CA71 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Shisa4Q8CA71 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Shisa4Q8CA71 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Shisa4Q8CA71 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Shisa4Q8CA71 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Shisa4Q8CA71 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC20.68■□□□□ 0.9
Shisa4Q8CA71 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Shisa4Q8CA71 AC124581.1-201ENSMUST00000225416 1399 ntBASIC20.68■□□□□ 0.9
Shisa4Q8CA71 Gm7712-202ENSMUST00000222331 1510 ntBASIC20.68■□□□□ 0.9
Shisa4Q8CA71 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Shisa4Q8CA71 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Shisa4Q8CA71 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Shisa4Q8CA71 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Shisa4Q8CA71 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Shisa4Q8CA71 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
Shisa4Q8CA71 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Shisa4Q8CA71 Mir5122-201ENSMUST00000175004 89 ntBASIC20.67■□□□□ 0.9
Shisa4Q8CA71 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Shisa4Q8CA71 Gm10517-202ENSMUST00000192970 758 ntBASIC20.67■□□□□ 0.9
Shisa4Q8CA71 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Shisa4Q8CA71 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Shisa4Q8CA71 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Shisa4Q8CA71 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC20.67■□□□□ 0.9
Shisa4Q8CA71 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Shisa4Q8CA71 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Shisa4Q8CA71 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Shisa4Q8CA71 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC20.67■□□□□ 0.9
Shisa4Q8CA71 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms