Protein–RNA interactions for Protein: Q8C878

Uba3, NEDD8-activating enzyme E1 catalytic subunit, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Uba3Q8C878 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Uba3Q8C878 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Uba3Q8C878 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Uba3Q8C878 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC18.71■□□□□ 0.59
Uba3Q8C878 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Uba3Q8C878 Gm37820-201ENSMUST00000194021 2147 ntBASIC18.71■□□□□ 0.59
Uba3Q8C878 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Uba3Q8C878 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Uba3Q8C878 Gm10654-201ENSMUST00000098653 1633 ntBASIC18.71■□□□□ 0.58
Uba3Q8C878 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.58
Uba3Q8C878 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Uba3Q8C878 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Uba3Q8C878 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Uba3Q8C878 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
Uba3Q8C878 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC18.7■□□□□ 0.58
Uba3Q8C878 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Uba3Q8C878 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC18.7■□□□□ 0.58
Uba3Q8C878 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC18.7■□□□□ 0.58
Uba3Q8C878 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC18.7■□□□□ 0.58
Uba3Q8C878 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC18.7■□□□□ 0.58
Uba3Q8C878 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Uba3Q8C878 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Uba3Q8C878 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Uba3Q8C878 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Uba3Q8C878 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Uba3Q8C878 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Uba3Q8C878 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Uba3Q8C878 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Uba3Q8C878 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Uba3Q8C878 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC18.69■□□□□ 0.58
Uba3Q8C878 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Uba3Q8C878 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Uba3Q8C878 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Uba3Q8C878 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Uba3Q8C878 Gm22240-201ENSMUST00000175225 82 ntBASIC18.69■□□□□ 0.58
Uba3Q8C878 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Uba3Q8C878 Gm10698-201ENSMUST00000182663 604 ntBASIC18.69■□□□□ 0.58
Uba3Q8C878 Gm29241-201ENSMUST00000189260 1096 ntBASIC18.69■□□□□ 0.58
Uba3Q8C878 Gm42545-201ENSMUST00000202755 922 ntBASIC18.69■□□□□ 0.58
Uba3Q8C878 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Uba3Q8C878 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Uba3Q8C878 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Uba3Q8C878 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Uba3Q8C878 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Uba3Q8C878 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Uba3Q8C878 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Uba3Q8C878 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Uba3Q8C878 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Uba3Q8C878 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Uba3Q8C878 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Uba3Q8C878 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Uba3Q8C878 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Uba3Q8C878 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Uba3Q8C878 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Uba3Q8C878 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Uba3Q8C878 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Uba3Q8C878 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC18.68■□□□□ 0.58
Uba3Q8C878 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Uba3Q8C878 Mir6349-201ENSMUST00000184059 97 ntBASIC18.68■□□□□ 0.58
Uba3Q8C878 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC18.68■□□□□ 0.58
Uba3Q8C878 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC18.68■□□□□ 0.58
Uba3Q8C878 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Uba3Q8C878 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Uba3Q8C878 Rarb-207ENSMUST00000225921 2756 ntBASIC18.68■□□□□ 0.58
Uba3Q8C878 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Uba3Q8C878 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Uba3Q8C878 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Uba3Q8C878 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Uba3Q8C878 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Uba3Q8C878 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Uba3Q8C878 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Uba3Q8C878 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Uba3Q8C878 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC18.67■□□□□ 0.58
Uba3Q8C878 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC18.67■□□□□ 0.58
Uba3Q8C878 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Uba3Q8C878 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Uba3Q8C878 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Uba3Q8C878 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC18.67■□□□□ 0.58
Uba3Q8C878 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Uba3Q8C878 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Uba3Q8C878 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC18.67■□□□□ 0.58
Uba3Q8C878 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Uba3Q8C878 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Uba3Q8C878 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Uba3Q8C878 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Uba3Q8C878 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Uba3Q8C878 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Uba3Q8C878 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Uba3Q8C878 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Uba3Q8C878 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Uba3Q8C878 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Uba3Q8C878 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Uba3Q8C878 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC18.66■□□□□ 0.58
Uba3Q8C878 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Uba3Q8C878 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Uba3Q8C878 Gm18025-201ENSMUST00000221733 862 ntBASIC18.66■□□□□ 0.58
Uba3Q8C878 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Uba3Q8C878 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC18.66■□□□□ 0.58
Uba3Q8C878 Idnk-204ENSMUST00000226010 1898 ntBASIC18.66■□□□□ 0.58
Uba3Q8C878 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 52.1 ms