Protein–RNA interactions for Protein: Q8BYH8

Chd9, Chromodomain-helicase-DNA-binding protein 9, mousemouse

Predictions only

Length 2,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd9Q8BYH8 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Chd9Q8BYH8 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Chd9Q8BYH8 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Chd9Q8BYH8 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Chd9Q8BYH8 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Chd9Q8BYH8 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Chd9Q8BYH8 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Chd9Q8BYH8 Gm12085-201ENSMUST00000119263 940 ntBASIC14.02□□□□□ -0.16
Chd9Q8BYH8 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Chd9Q8BYH8 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Chd9Q8BYH8 Gm15853-202ENSMUST00000195518 2041 ntBASIC14.02□□□□□ -0.16
Chd9Q8BYH8 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Chd9Q8BYH8 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Chd9Q8BYH8 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Chd9Q8BYH8 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Chd9Q8BYH8 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Chd9Q8BYH8 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Chd9Q8BYH8 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC14.02□□□□□ -0.17
Chd9Q8BYH8 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Chd9Q8BYH8 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Chd9Q8BYH8 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Chd9Q8BYH8 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Chd9Q8BYH8 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC14.02□□□□□ -0.17
Chd9Q8BYH8 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC14.02□□□□□ -0.17
Chd9Q8BYH8 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Chd9Q8BYH8 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Chd9Q8BYH8 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.17
Chd9Q8BYH8 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Chd9Q8BYH8 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Chd9Q8BYH8 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Chd9Q8BYH8 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC14.01□□□□□ -0.17
Chd9Q8BYH8 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Chd9Q8BYH8 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Chd9Q8BYH8 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Chd9Q8BYH8 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Chd9Q8BYH8 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Chd9Q8BYH8 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Chd9Q8BYH8 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Chd9Q8BYH8 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Chd9Q8BYH8 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Chd9Q8BYH8 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Chd9Q8BYH8 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Chd9Q8BYH8 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Chd9Q8BYH8 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Chd9Q8BYH8 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Chd9Q8BYH8 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Chd9Q8BYH8 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
Chd9Q8BYH8 Gm34220-201ENSMUST00000223001 2709 ntBASIC14.01□□□□□ -0.17
Chd9Q8BYH8 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Chd9Q8BYH8 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Chd9Q8BYH8 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
Chd9Q8BYH8 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Chd9Q8BYH8 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Chd9Q8BYH8 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Chd9Q8BYH8 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Chd9Q8BYH8 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Chd9Q8BYH8 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Chd9Q8BYH8 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC14□□□□□ -0.17
Chd9Q8BYH8 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC14□□□□□ -0.17
Chd9Q8BYH8 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Chd9Q8BYH8 Gm5540-201ENSMUST00000131852 1848 ntBASIC14□□□□□ -0.17
Chd9Q8BYH8 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Chd9Q8BYH8 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC14□□□□□ -0.17
Chd9Q8BYH8 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Chd9Q8BYH8 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC14□□□□□ -0.17
Chd9Q8BYH8 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
Chd9Q8BYH8 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Chd9Q8BYH8 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Chd9Q8BYH8 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC14□□□□□ -0.17
Chd9Q8BYH8 Gm44544-201ENSMUST00000207052 1844 ntBASIC14□□□□□ -0.17
Chd9Q8BYH8 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Chd9Q8BYH8 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC14□□□□□ -0.17
Chd9Q8BYH8 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Chd9Q8BYH8 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC14□□□□□ -0.17
Chd9Q8BYH8 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC14□□□□□ -0.17
Chd9Q8BYH8 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC14□□□□□ -0.17
Chd9Q8BYH8 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC14□□□□□ -0.17
Chd9Q8BYH8 Hsf1-204ENSMUST00000226872 2104 ntBASIC14□□□□□ -0.17
Chd9Q8BYH8 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Chd9Q8BYH8 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Chd9Q8BYH8 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Chd9Q8BYH8 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Chd9Q8BYH8 Gm1401-201ENSMUST00000122048 772 ntBASIC13.99□□□□□ -0.17
Chd9Q8BYH8 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC13.99□□□□□ -0.17
Chd9Q8BYH8 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Chd9Q8BYH8 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC13.99□□□□□ -0.17
Chd9Q8BYH8 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC13.99□□□□□ -0.17
Chd9Q8BYH8 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
Chd9Q8BYH8 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Chd9Q8BYH8 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
Chd9Q8BYH8 Gm16061-201ENSMUST00000122167 857 ntBASIC13.99□□□□□ -0.17
Chd9Q8BYH8 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC13.99□□□□□ -0.17
Chd9Q8BYH8 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC13.99□□□□□ -0.17
Chd9Q8BYH8 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC13.99□□□□□ -0.17
Chd9Q8BYH8 AC159301.1-201ENSMUST00000225130 1182 ntBASIC13.99□□□□□ -0.17
Chd9Q8BYH8 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Chd9Q8BYH8 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Chd9Q8BYH8 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Chd9Q8BYH8 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC13.98□□□□□ -0.17
Chd9Q8BYH8 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms