Protein–RNA interactions for Protein: Q8BTW8

Cdk5rap1, CDK5 regulatory subunit-associated protein 1, mousemouse

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap1Q8BTW8 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Cdk5rap1Q8BTW8 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cdk5rap1Q8BTW8 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Cdk5rap1Q8BTW8 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cdk5rap1Q8BTW8 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cdk5rap1Q8BTW8 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cdk5rap1Q8BTW8 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Cdk5rap1Q8BTW8 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC16.84■□□□□ 0.29
Cdk5rap1Q8BTW8 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Cdk5rap1Q8BTW8 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Cdk5rap1Q8BTW8 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cdk5rap1Q8BTW8 Gm13836-201ENSMUST00000121159 501 ntBASIC16.83■□□□□ 0.28
Cdk5rap1Q8BTW8 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Cdk5rap1Q8BTW8 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cdk5rap1Q8BTW8 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Cdk5rap1Q8BTW8 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cdk5rap1Q8BTW8 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC16.82■□□□□ 0.28
Cdk5rap1Q8BTW8 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cdk5rap1Q8BTW8 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cdk5rap1Q8BTW8 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Cdk5rap1Q8BTW8 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cdk5rap1Q8BTW8 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cdk5rap1Q8BTW8 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cdk5rap1Q8BTW8 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC16.82■□□□□ 0.28
Cdk5rap1Q8BTW8 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cdk5rap1Q8BTW8 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cdk5rap1Q8BTW8 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Cdk5rap1Q8BTW8 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC16.82■□□□□ 0.28
Cdk5rap1Q8BTW8 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Cdk5rap1Q8BTW8 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC16.82■□□□□ 0.28
Cdk5rap1Q8BTW8 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC16.82■□□□□ 0.28
Cdk5rap1Q8BTW8 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cdk5rap1Q8BTW8 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cdk5rap1Q8BTW8 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC16.82■□□□□ 0.28
Cdk5rap1Q8BTW8 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cdk5rap1Q8BTW8 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Cdk5rap1Q8BTW8 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Cdk5rap1Q8BTW8 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Cdk5rap1Q8BTW8 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC16.82■□□□□ 0.28
Cdk5rap1Q8BTW8 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Cdk5rap1Q8BTW8 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cdk5rap1Q8BTW8 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC16.82■□□□□ 0.28
Cdk5rap1Q8BTW8 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cdk5rap1Q8BTW8 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
Cdk5rap1Q8BTW8 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cdk5rap1Q8BTW8 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cdk5rap1Q8BTW8 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cdk5rap1Q8BTW8 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cdk5rap1Q8BTW8 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Cdk5rap1Q8BTW8 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Cdk5rap1Q8BTW8 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cdk5rap1Q8BTW8 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Cdk5rap1Q8BTW8 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cdk5rap1Q8BTW8 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Cdk5rap1Q8BTW8 Gm10517-202ENSMUST00000192970 758 ntBASIC16.81■□□□□ 0.28
Cdk5rap1Q8BTW8 Gm3375-201ENSMUST00000203929 796 ntBASIC16.81■□□□□ 0.28
Cdk5rap1Q8BTW8 Gm30025-201ENSMUST00000218555 728 ntBASIC16.81■□□□□ 0.28
Cdk5rap1Q8BTW8 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Cdk5rap1Q8BTW8 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cdk5rap1Q8BTW8 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Cdk5rap1Q8BTW8 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cdk5rap1Q8BTW8 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cdk5rap1Q8BTW8 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cdk5rap1Q8BTW8 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cdk5rap1Q8BTW8 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Cdk5rap1Q8BTW8 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Cdk5rap1Q8BTW8 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cdk5rap1Q8BTW8 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cdk5rap1Q8BTW8 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cdk5rap1Q8BTW8 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC16.8■□□□□ 0.28
Cdk5rap1Q8BTW8 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cdk5rap1Q8BTW8 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Cdk5rap1Q8BTW8 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Cdk5rap1Q8BTW8 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
Cdk5rap1Q8BTW8 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC16.8■□□□□ 0.28
Cdk5rap1Q8BTW8 Otx2os1-204ENSMUST00000227221 751 ntBASIC16.8■□□□□ 0.28
Cdk5rap1Q8BTW8 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Cdk5rap1Q8BTW8 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Cdk5rap1Q8BTW8 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cdk5rap1Q8BTW8 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cdk5rap1Q8BTW8 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC16.8■□□□□ 0.28
Cdk5rap1Q8BTW8 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cdk5rap1Q8BTW8 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cdk5rap1Q8BTW8 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
Cdk5rap1Q8BTW8 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
Cdk5rap1Q8BTW8 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cdk5rap1Q8BTW8 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cdk5rap1Q8BTW8 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cdk5rap1Q8BTW8 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cdk5rap1Q8BTW8 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cdk5rap1Q8BTW8 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cdk5rap1Q8BTW8 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cdk5rap1Q8BTW8 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cdk5rap1Q8BTW8 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cdk5rap1Q8BTW8 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cdk5rap1Q8BTW8 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cdk5rap1Q8BTW8 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Cdk5rap1Q8BTW8 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC16.79■□□□□ 0.28
Cdk5rap1Q8BTW8 AC153881.2-201ENSMUST00000214877 204 ntBASIC16.79■□□□□ 0.28
Cdk5rap1Q8BTW8 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 45.1 ms