Protein–RNA interactions for Protein: Q8BR65

Suds3, Sin3 histone deacetylase corepressor complex component SDS3, mousemouse

Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Suds3Q8BR65 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Suds3Q8BR65 Gm10653-202ENSMUST00000139570 835 ntBASIC18.23■□□□□ 0.51
Suds3Q8BR65 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Suds3Q8BR65 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC18.23■□□□□ 0.51
Suds3Q8BR65 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Suds3Q8BR65 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Suds3Q8BR65 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Suds3Q8BR65 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Suds3Q8BR65 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Suds3Q8BR65 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Suds3Q8BR65 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Suds3Q8BR65 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Suds3Q8BR65 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Suds3Q8BR65 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Suds3Q8BR65 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Suds3Q8BR65 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Suds3Q8BR65 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC18.22■□□□□ 0.51
Suds3Q8BR65 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Suds3Q8BR65 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Suds3Q8BR65 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC18.22■□□□□ 0.51
Suds3Q8BR65 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Suds3Q8BR65 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Suds3Q8BR65 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Suds3Q8BR65 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Suds3Q8BR65 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Suds3Q8BR65 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Suds3Q8BR65 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
Suds3Q8BR65 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Suds3Q8BR65 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Suds3Q8BR65 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Suds3Q8BR65 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Suds3Q8BR65 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Suds3Q8BR65 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Suds3Q8BR65 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Suds3Q8BR65 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Suds3Q8BR65 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Suds3Q8BR65 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Suds3Q8BR65 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Suds3Q8BR65 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Suds3Q8BR65 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Suds3Q8BR65 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Suds3Q8BR65 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Suds3Q8BR65 Gm38308-201ENSMUST00000194934 1809 ntBASIC18.21■□□□□ 0.51
Suds3Q8BR65 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC18.21■□□□□ 0.51
Suds3Q8BR65 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Suds3Q8BR65 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Suds3Q8BR65 Fst-202ENSMUST00000223640 2612 ntBASIC18.2■□□□□ 0.5
Suds3Q8BR65 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Suds3Q8BR65 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Suds3Q8BR65 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Suds3Q8BR65 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Suds3Q8BR65 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC18.2■□□□□ 0.5
Suds3Q8BR65 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Suds3Q8BR65 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Suds3Q8BR65 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Suds3Q8BR65 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Suds3Q8BR65 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Suds3Q8BR65 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Suds3Q8BR65 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Suds3Q8BR65 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Suds3Q8BR65 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Suds3Q8BR65 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Suds3Q8BR65 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Suds3Q8BR65 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Suds3Q8BR65 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Suds3Q8BR65 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Suds3Q8BR65 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC18.19■□□□□ 0.5
Suds3Q8BR65 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
Suds3Q8BR65 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC18.19■□□□□ 0.5
Suds3Q8BR65 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Suds3Q8BR65 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Suds3Q8BR65 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Suds3Q8BR65 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Suds3Q8BR65 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Suds3Q8BR65 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Suds3Q8BR65 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Suds3Q8BR65 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Suds3Q8BR65 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Suds3Q8BR65 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Suds3Q8BR65 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC18.18■□□□□ 0.5
Suds3Q8BR65 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
Suds3Q8BR65 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Suds3Q8BR65 Gm37812-201ENSMUST00000195216 2475 ntBASIC18.18■□□□□ 0.5
Suds3Q8BR65 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Suds3Q8BR65 AC123834.2-201ENSMUST00000224038 2340 ntBASIC18.18■□□□□ 0.5
Suds3Q8BR65 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Suds3Q8BR65 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Suds3Q8BR65 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Suds3Q8BR65 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Suds3Q8BR65 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Suds3Q8BR65 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Suds3Q8BR65 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Suds3Q8BR65 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Suds3Q8BR65 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Suds3Q8BR65 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Suds3Q8BR65 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Suds3Q8BR65 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Suds3Q8BR65 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Suds3Q8BR65 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Suds3Q8BR65 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms