Protein–RNA interactions for Protein: Q8BP27

Sfr1, Swi5-dependent recombination DNA repair protein 1 homolog, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sfr1Q8BP27 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Sfr1Q8BP27 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Sfr1Q8BP27 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Sfr1Q8BP27 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Sfr1Q8BP27 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Sfr1Q8BP27 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Sfr1Q8BP27 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
Sfr1Q8BP27 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Sfr1Q8BP27 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Sfr1Q8BP27 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Sfr1Q8BP27 Nrn1-203ENSMUST00000223611 1443 ntBASIC18.03■□□□□ 0.48
Sfr1Q8BP27 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Sfr1Q8BP27 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Sfr1Q8BP27 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Sfr1Q8BP27 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Sfr1Q8BP27 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Sfr1Q8BP27 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Sfr1Q8BP27 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Sfr1Q8BP27 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Sfr1Q8BP27 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Sfr1Q8BP27 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Sfr1Q8BP27 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Sfr1Q8BP27 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Sfr1Q8BP27 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC18.02■□□□□ 0.48
Sfr1Q8BP27 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
Sfr1Q8BP27 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Sfr1Q8BP27 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC18.02■□□□□ 0.48
Sfr1Q8BP27 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Sfr1Q8BP27 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC18.02■□□□□ 0.48
Sfr1Q8BP27 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Sfr1Q8BP27 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC18.02■□□□□ 0.48
Sfr1Q8BP27 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Sfr1Q8BP27 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Sfr1Q8BP27 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Sfr1Q8BP27 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC18.01■□□□□ 0.47
Sfr1Q8BP27 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Sfr1Q8BP27 H2-K2-201ENSMUST00000174250 1049 ntBASIC18.01■□□□□ 0.47
Sfr1Q8BP27 Gm22240-201ENSMUST00000175225 82 ntBASIC18.01■□□□□ 0.47
Sfr1Q8BP27 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Sfr1Q8BP27 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Sfr1Q8BP27 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Sfr1Q8BP27 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Sfr1Q8BP27 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Sfr1Q8BP27 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Sfr1Q8BP27 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Sfr1Q8BP27 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Sfr1Q8BP27 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Sfr1Q8BP27 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC18■□□□□ 0.47
Sfr1Q8BP27 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Sfr1Q8BP27 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Sfr1Q8BP27 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC18■□□□□ 0.47
Sfr1Q8BP27 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC18■□□□□ 0.47
Sfr1Q8BP27 Mir6349-201ENSMUST00000184059 97 ntBASIC18■□□□□ 0.47
Sfr1Q8BP27 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Sfr1Q8BP27 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Sfr1Q8BP27 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC18■□□□□ 0.47
Sfr1Q8BP27 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Sfr1Q8BP27 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC18■□□□□ 0.47
Sfr1Q8BP27 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Sfr1Q8BP27 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Sfr1Q8BP27 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Sfr1Q8BP27 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Sfr1Q8BP27 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Sfr1Q8BP27 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC17.99■□□□□ 0.47
Sfr1Q8BP27 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Sfr1Q8BP27 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Sfr1Q8BP27 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC17.99■□□□□ 0.47
Sfr1Q8BP27 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC17.99■□□□□ 0.47
Sfr1Q8BP27 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Sfr1Q8BP27 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Sfr1Q8BP27 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Sfr1Q8BP27 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Sfr1Q8BP27 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Sfr1Q8BP27 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Sfr1Q8BP27 AC123834.2-201ENSMUST00000224038 2340 ntBASIC17.98■□□□□ 0.47
Sfr1Q8BP27 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Sfr1Q8BP27 Gm15375-201ENSMUST00000119510 849 ntBASIC17.98■□□□□ 0.47
Sfr1Q8BP27 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC17.98■□□□□ 0.47
Sfr1Q8BP27 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC17.98■□□□□ 0.47
Sfr1Q8BP27 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Sfr1Q8BP27 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Sfr1Q8BP27 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Sfr1Q8BP27 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Sfr1Q8BP27 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Sfr1Q8BP27 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Sfr1Q8BP27 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Sfr1Q8BP27 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Sfr1Q8BP27 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Sfr1Q8BP27 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Sfr1Q8BP27 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Sfr1Q8BP27 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC17.97■□□□□ 0.47
Sfr1Q8BP27 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Sfr1Q8BP27 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
Sfr1Q8BP27 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC17.97■□□□□ 0.47
Sfr1Q8BP27 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC17.97■□□□□ 0.47
Sfr1Q8BP27 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Sfr1Q8BP27 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Sfr1Q8BP27 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC17.97■□□□□ 0.47
Sfr1Q8BP27 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Sfr1Q8BP27 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms