Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC23.44■■□□□ 1.34
Col16a1Q8BLX7 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC23.44■■□□□ 1.34
Col16a1Q8BLX7 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Col16a1Q8BLX7 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
Col16a1Q8BLX7 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC23.44■■□□□ 1.34
Col16a1Q8BLX7 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
Col16a1Q8BLX7 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
Col16a1Q8BLX7 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Col16a1Q8BLX7 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC23.43■■□□□ 1.34
Col16a1Q8BLX7 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC23.42■■□□□ 1.34
Col16a1Q8BLX7 Notumos-201ENSMUST00000151998 2659 ntBASIC23.42■■□□□ 1.34
Col16a1Q8BLX7 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Col16a1Q8BLX7 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
Col16a1Q8BLX7 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
Col16a1Q8BLX7 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC23.42■■□□□ 1.34
Col16a1Q8BLX7 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC23.42■■□□□ 1.34
Col16a1Q8BLX7 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Col16a1Q8BLX7 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC23.42■■□□□ 1.34
Col16a1Q8BLX7 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Col16a1Q8BLX7 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
Col16a1Q8BLX7 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Col16a1Q8BLX7 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Col16a1Q8BLX7 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC23.41■■□□□ 1.34
Col16a1Q8BLX7 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC23.41■■□□□ 1.34
Col16a1Q8BLX7 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC23.41■■□□□ 1.34
Col16a1Q8BLX7 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC23.41■■□□□ 1.34
Col16a1Q8BLX7 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC23.41■■□□□ 1.34
Col16a1Q8BLX7 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC23.41■■□□□ 1.34
Col16a1Q8BLX7 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC23.41■■□□□ 1.34
Col16a1Q8BLX7 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Col16a1Q8BLX7 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
Col16a1Q8BLX7 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Col16a1Q8BLX7 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC23.41■■□□□ 1.34
Col16a1Q8BLX7 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC23.41■■□□□ 1.34
Col16a1Q8BLX7 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Col16a1Q8BLX7 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
Col16a1Q8BLX7 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC23.4■■□□□ 1.34
Col16a1Q8BLX7 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
Col16a1Q8BLX7 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Col16a1Q8BLX7 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Col16a1Q8BLX7 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
Col16a1Q8BLX7 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC23.4■■□□□ 1.34
Col16a1Q8BLX7 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Col16a1Q8BLX7 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Col16a1Q8BLX7 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC23.4■■□□□ 1.34
Col16a1Q8BLX7 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Col16a1Q8BLX7 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC23.4■■□□□ 1.34
Col16a1Q8BLX7 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
Col16a1Q8BLX7 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC23.39■■□□□ 1.34
Col16a1Q8BLX7 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
Col16a1Q8BLX7 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC23.39■■□□□ 1.34
Col16a1Q8BLX7 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
Col16a1Q8BLX7 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
Col16a1Q8BLX7 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC23.39■■□□□ 1.33
Col16a1Q8BLX7 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
Col16a1Q8BLX7 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC23.39■■□□□ 1.33
Col16a1Q8BLX7 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC23.39■■□□□ 1.33
Col16a1Q8BLX7 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC23.39■■□□□ 1.33
Col16a1Q8BLX7 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
Col16a1Q8BLX7 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC23.39■■□□□ 1.33
Col16a1Q8BLX7 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC23.38■■□□□ 1.33
Col16a1Q8BLX7 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Col16a1Q8BLX7 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Col16a1Q8BLX7 Gm37374-201ENSMUST00000194954 1829 ntBASIC23.38■■□□□ 1.33
Col16a1Q8BLX7 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC23.38■■□□□ 1.33
Col16a1Q8BLX7 Gm3272-201ENSMUST00000181181 1229 ntBASIC23.38■■□□□ 1.33
Col16a1Q8BLX7 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
Col16a1Q8BLX7 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Col16a1Q8BLX7 Gm10566-201ENSMUST00000086739 996 ntBASIC23.38■■□□□ 1.33
Col16a1Q8BLX7 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC23.38■■□□□ 1.33
Col16a1Q8BLX7 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC23.37■■□□□ 1.33
Col16a1Q8BLX7 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC23.37■■□□□ 1.33
Col16a1Q8BLX7 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
Col16a1Q8BLX7 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
Col16a1Q8BLX7 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC23.37■■□□□ 1.33
Col16a1Q8BLX7 Gm11355-201ENSMUST00000121120 306 ntBASIC23.37■■□□□ 1.33
Col16a1Q8BLX7 Mir3081-201ENSMUST00000175305 84 ntBASIC23.37■■□□□ 1.33
Col16a1Q8BLX7 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC23.37■■□□□ 1.33
Col16a1Q8BLX7 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Col16a1Q8BLX7 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Col16a1Q8BLX7 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC23.37■■□□□ 1.33
Col16a1Q8BLX7 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC23.37■■□□□ 1.33
Col16a1Q8BLX7 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC23.37■■□□□ 1.33
Col16a1Q8BLX7 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC23.37■■□□□ 1.33
Col16a1Q8BLX7 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Col16a1Q8BLX7 Gm11860-201ENSMUST00000122346 1010 ntBASIC23.36■■□□□ 1.33
Col16a1Q8BLX7 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Col16a1Q8BLX7 Otx2os1-206ENSMUST00000228153 787 ntBASIC23.36■■□□□ 1.33
Col16a1Q8BLX7 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC23.36■■□□□ 1.33
Col16a1Q8BLX7 Gm43231-201ENSMUST00000202960 2258 ntBASIC23.36■■□□□ 1.33
Col16a1Q8BLX7 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
Col16a1Q8BLX7 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC23.36■■□□□ 1.33
Col16a1Q8BLX7 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Col16a1Q8BLX7 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC23.35■■□□□ 1.33
Col16a1Q8BLX7 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
Col16a1Q8BLX7 Gm18115-201ENSMUST00000221209 621 ntBASIC23.35■■□□□ 1.33
Col16a1Q8BLX7 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Col16a1Q8BLX7 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
Col16a1Q8BLX7 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Col16a1Q8BLX7 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC23.35■■□□□ 1.33
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms